CX300423
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300423 vs. ExPASy Swiss-Prot
Match: SRP54_MACFA (Signal recognition particle 54 kDa protein OS=Macaca fascicularis GN=SRP54 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.555e-11 Identity = 39/149 (26.17%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 2 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--ITPAQVREAEKSLKIMEAMIEAMTPEEREKPE---LLAESPVRRKRVAQDSGKTEQQVSQLVAQ---LFQMRVRMKNLMGVMEGGSL 424 D+ ++K E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG G ++ +E+ LK + ++++M +E + + + ++ P R +RVA+ SG + + V +L+ Q QM +M + G+ +GG + Sbjct: 299 DIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDM 446
BLAST of CX300423 vs. ExPASy Swiss-Prot
Match: SRP54_HUMAN (Signal recognition particle 54 kDa protein OS=Homo sapiens GN=SRP54 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.555e-11 Identity = 39/149 (26.17%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 2 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--ITPAQVREAEKSLKIMEAMIEAMTPEEREKPE---LLAESPVRRKRVAQDSGKTEQQVSQLVAQ---LFQMRVRMKNLMGVMEGGSL 424 D+ ++K E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG G ++ +E+ LK + ++++M +E + + + ++ P R +RVA+ SG + + V +L+ Q QM +M + G+ +GG + Sbjct: 299 DIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDM 446
BLAST of CX300423 vs. ExPASy Swiss-Prot
Match: SRP54_CANFA (Signal recognition particle 54 kDa protein OS=Canis familiaris GN=SRP54 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.555e-11 Identity = 39/149 (26.17%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 2 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--ITPAQVREAEKSLKIMEAMIEAMTPEEREKPE---LLAESPVRRKRVAQDSGKTEQQVSQLVAQ---LFQMRVRMKNLMGVMEGGSL 424 D+ ++K E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG G ++ +E+ LK + ++++M +E + + + ++ P R +RVA+ SG + + V +L+ Q QM +M + G+ +GG + Sbjct: 299 DIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDM 446
BLAST of CX300423 vs. ExPASy Swiss-Prot
Match: SRP54_BOVIN (Signal recognition particle 54 kDa protein OS=Bos taurus GN=SRP54 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.555e-11 Identity = 39/149 (26.17%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 2 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--ITPAQVREAEKSLKIMEAMIEAMTPEEREKPE---LLAESPVRRKRVAQDSGKTEQQVSQLVAQ---LFQMRVRMKNLMGVMEGGSL 424 D+ ++K E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG G ++ +E+ LK + ++++M +E + + + ++ P R +RVA+ SG + + V +L+ Q QM +M + G+ +GG + Sbjct: 299 DIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDM 446 The following BLAST results are available for this feature:
BLAST of CX300423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300423 ID=CX300423; Name=CX300423; organism=Citrus clementina; type=EST; length=463bpback to top |