CX300425

Overview
NameCX300425
Unique NameCX300425
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length434
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300425 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 2.028e-17
Identity = 39/69 (56.52%), Postives = 54/69 (78.26%), Query Frame = 1
Query:    7 RIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 213
            R+    + + +   FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  439 RVSFCTDSDPEPQGFHPVLSVLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
BLAST of CX300425 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.708e-17
Identity = 38/56 (67.86%), Postives = 49/56 (87.50%), Query Frame = 1
Query:   46 SFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 213
            SFHPV ++L +L KAPL PPG+PVVNAL +QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  452 SFHPVLSLLGFLFKAPLAPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
BLAST of CX300425 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.243e-16
Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = 1
Query:    7 RIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 213
            R+    + + +   FH V ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  439 RVSFCTDSDPEPQGFHTVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
BLAST of CX300425 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.042e-13
Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 1
Query:    1 STRIQLK-AEGEGK-FHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 213
            STRIQL+ AE E   +  F PV ++LSYL KAPLVP G+ VVN+L +QRA +ENILR C+GL P ++M LE +
Sbjct:  441 STRIQLRNAEKESAPWVPFKPVLSLLSYLCKAPLVPQGSQVVNSLFRQRAAIENILRGCIGLPPISHMTLEQR 513          
The following BLAST results are available for this feature:
BLAST of CX300425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
INO1_RAT2.028e-1756.52Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1_BOVIN7.708e-1767.86Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1_MOUSE2.243e-1655.07Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_DROME1.042e-1357.53Inositol-3-phosphate synthase OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionC07010B02SK SaltLeaf1 Citrus clementina cDNA clone C07010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300425 ID=CX300425; Name=CX300425; organism=Citrus clementina; type=EST; length=434bp
AGCACCAGGATCCAGCTCAAAGCTGAAGGAGAGGGCAAATTCCACTCTTT
CCACCCTGTGGCTACAATTCTCAGCTACCTCACCAAGGCTCCTCTGGTCC
CTCCAGGCACACCAGTGGTGAATGCGCTGTCGAAGCAGCGTGCAATGCTT
GAGAACATTCTGAGGGCTTGCGTTGGCTTGGCTCCTGAGAACAACATGAT
TTTGGAATACAAGTGAAGAACTTGCAGGGGAGAAAAGTGGAAGAACCGGT
TTTCCCTTTCTCTGTCACCAATCAAAGCTGTGGTGGTCCATTTAATTACT
GATTGTAATGTCTTGTGTCATGAAATTGTGGTTAATATTAGTGTGTCCTG
TATGTTTGCTCTTTTATTTTTTTAATGAAGGTGCTGGAGTGTAGCCCATT
GCCTTTGTAGCTCATTTCGGAGCATGAAATCTCT
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