CX300440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_PEA (Glycine cleavage system H protein, mitochondrial OS=Pisum sativum GN=GDCSH PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.338e-44 Identity = 90/114 (78.95%), Postives = 99/114 (86.84%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASK---TPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 MALRMWASSTANAL++S +S+ +P F++SRCFS+VLDGLKYA SHEWVKHEGSVAT GITDHAQDHL EVVFVELPE G S +G GF VESVKATSDVNSPISGEVIEVN Sbjct: 1 MALRMWASSTANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVN 114
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_FLAPU (Glycine cleavage system H protein, mitochondrial (Fragment) OS=Flaveria pubescens GN=GDCSH PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.132e-43 Identity = 87/111 (78.38%), Postives = 95/111 (85.59%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 MALRMWASSTANALR+S A++ LSRCFSSVLDGLKYA+SHEWVKHEGSVAT GITDHAQDHL EVVFV+LPE G S + GF VESVKATSDVNSPISGE++EVN Sbjct: 1 MALRMWASSTANALRLSSATRPHYSPLSRCFSSVLDGLKYANSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVN 111
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_FLAAN (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala GN=GDCSH PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.479e-43 Identity = 87/111 (78.38%), Postives = 95/111 (85.59%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 MALRMWASSTANALR+S A++ LSRCFSSVLDGLKYA+SHEWVKHEGSVAT GITDHAQDHL EVVFV+LPE G S + GF VESVKATSDVNSPISGE++EVN Sbjct: 1 MALRMWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVN 111
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_FLAPR (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei GN=GDCSH PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 4.303e-43 Identity = 86/111 (77.48%), Postives = 95/111 (85.59%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 MALR+WASSTANALR+S A++ LSRCFSSVLDGLKYA+SHEWVKHEGSVAT GITDHAQDHL EVVFV+LPE G S + GF VESVKATSDVNSPISGE++EVN Sbjct: 1 MALRIWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVN 111
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_ORYSJ (Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. japonica GN=GDCSH PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.643e-42 Identity = 85/114 (74.56%), Postives = 97/114 (85.09%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 MALR+WASS ANAL+ISC+ T PA+++SR FS+VLDGLKY+SSHEWVK++GSVAT GITDHAQ HL EVVFVELPE GA QGG F VESVKATSD+NSPISGEV+EVN Sbjct: 1 MALRLWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIGITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVN 114
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_ORYSI (Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. indica GN=GDCSH PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.643e-42 Identity = 85/114 (74.56%), Postives = 97/114 (85.09%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 MALR+WASS ANAL+ISC+ T PA+++SR FS+VLDGLKY+SSHEWVK++GSVAT GITDHAQ HL EVVFVELPE GA QGG F VESVKATSD+NSPISGEV+EVN Sbjct: 1 MALRLWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIGITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVN 114
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_FLATR (Glycine cleavage system H protein, mitochondrial OS=Flaveria trinervia GN=GDCSH PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 6.870e-41 Identity = 86/113 (76.11%), Postives = 93/113 (82.30%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKTPAFALSRCFSS--VLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 MALR+WASSTA ALR+S AS+ L RCFSS VLDGLKYA+SHEWVKHEGSVAT GITDHAQDHL EVVFVELPE G S + GF VESVKATSDVNSPISGE++EVN Sbjct: 1 MALRIWASSTAKALRLSSASRPHFSPLFRCFSSAAVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEVGGSVTKATGFGAVESVKATSDVNSPISGEIVEVN 113
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_FLAAU (Glycine cleavage system H protein, mitochondrial (Fragment) OS=Flaveria australasica GN=GDCSH PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 6.870e-41 Identity = 86/113 (76.11%), Postives = 93/113 (82.30%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKTPAFALSRCFSS--VLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 MALR+WASSTA ALR+S AS+ L RCFSS VLDGLKYA+SHEWVKHEGSVAT GITDHAQDHL EVVFVELPE G S + GF VESVKATSDVNSPISGE++EVN Sbjct: 1 MALRIWASSTAKALRLSSASRPHFSPLFRCFSSAAVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEVGGSVTKATGFGAVESVKATSDVNSPISGEIVEVN 113
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH2_ARATH (Probable glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana GN=At1g32470 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 6.870e-41 Identity = 87/115 (75.65%), Postives = 98/115 (85.22%), Query Frame = 1 Query: 37 MALRMWASSTANALRISC-ASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 MALRMWASSTANAL++S ASK+ PAF++SRCFSSVL+GLKYA+SHEWVKHEGSVAT GITDHAQDHL EVVFVELPE +S + F VESVKATS++ SPISGEVIEVN Sbjct: 1 MALRMWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVN 115
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_MESCR (Glycine cleavage system H protein, mitochondrial OS=Mesembryanthemum crystallinum GN=GDCSH PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 5.816e-40 Identity = 86/114 (75.44%), Postives = 93/114 (81.58%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 MALRMWASS ANAL +SCA K+ PA +LSRCFS+VLDGLKYASSHEWVKH GSVAT GITDHAQ HL +VVF ELPE GA G F VESVKATSDVNSPISGE++EVN Sbjct: 1 MALRMWASSAANALGVSCAPKSHLLPALSLSRCFSTVLDGLKYASSHEWVKHGGSVATIGITDHAQGHLGDVVFAELPEGGA-VSAGKPFASVESVKATSDVNSPISGEIVEVN 113 The following BLAST results are available for this feature:
BLAST of CX300440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300440 ID=CX300440; Name=CX300440; organism=Citrus clementina; type=EST; length=369bpback to top |