CX300440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH1_ARATH (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSH PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.213e-37 Identity = 80/114 (70.18%), Postives = 91/114 (79.82%), Query Frame = 1 Query: 37 MALRMWASSTANALRISCA---SKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 MALRMWASSTANAL++S + S F+ SRCFS+VL+GLKYA+SHEWVKHEGSVAT GIT HAQDHL EVVFVELPE S + F VESVKATS++ SPISGE+IEVN Sbjct: 1 MALRMWASSTANALKLSSSVSKSHLSPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATIGITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVN 114
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_RUBXD (Glycine cleavage system H protein OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=gcvH PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.540e-19 Identity = 45/74 (60.81%), Postives = 54/74 (72.97%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 L Y +HEW + EG AT GITDHAQ+ L +VVFVELPE G+S + G F +ESVKA SD+ SP+SGEV EVN Sbjct: 8 LVYTRTHEWARIEGDAATVGITDHAQEELGDVVFVELPEVGSSVQAGEPFGTIESVKAVSDLYSPVSGEVTEVN 81
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_ALCBS (Glycine cleavage system H protein OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gcvH PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.333e-19 Identity = 44/74 (59.46%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 L+YASSHEW K E VAT GI+DHAQD + ++V+VELPE G G VVESVKA SD+ SP+SGE++E+N Sbjct: 8 LRYASSHEWAKVEDGVATVGISDHAQDAMGDLVYVELPEVGQVVAAGDETGVVESVKAASDIYSPVSGEIVEIN 81
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_AGRT5 (Glycine cleavage system H protein OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gcvH PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.654e-19 Identity = 42/74 (56.76%), Postives = 54/74 (72.97%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LK+ + HEW+K EG +AT GIT HA + L ++VFVELPE GA+F + G VESVKA SDV P+ GEV+E+N Sbjct: 2 LKFTAEHEWLKFEGDIATVGITSHAAEQLGDLVFVELPEVGATFAKDGDAATVESVKAASDVYCPLDGEVVEIN 75
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_RHIME (Glycine cleavage system H protein OS=Rhizobium meliloti GN=gcvH PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.261e-18 Identity = 43/74 (58.11%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LK+ HEW+K +G VAT GIT+HA L ++VFVELPE GASF +G VESVKA SDV P+ GE++EVN Sbjct: 2 LKFTEEHEWLKIDGDVATVGITEHAAGQLGDLVFVELPEAGASFSKGDSAATVESVKAASDVYCPLDGEIVEVN 75
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_RHISN (Glycine cleavage system H protein OS=Rhizobium sp. (strain NGR234) GN=gcvH PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.647e-18 Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LK+ HEW+K EG VAT GIT+HA L ++VFVELPE GA+F +G VESVKA SDV P+ GE++E+N Sbjct: 2 LKFTEEHEWLKVEGGVATVGITEHAAGQLGDLVFVELPEAGATFSKGDSAATVESVKAASDVYCPLDGEIVEIN 75
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_STAAB (Glycine cleavage system H protein OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=gcvH PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.151e-18 Identity = 44/79 (55.70%), Postives = 59/79 (74.68%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 +V + LKY++ HEWVK EG+VAT GIT++AQ L ++VFVELPET +G F VESVK S++ +PISG+V+EVN Sbjct: 2 AVPNELKYSNEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_STAAW (Glycine cleavage system H protein OS=Staphylococcus aureus (strain MW2) GN=gcvH PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.809e-18 Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 +V + LKY+ HEWVK EG+VAT GIT++AQ L ++VFVELPET +G F VESVK S++ +PISG+V+EVN Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_STAAS (Glycine cleavage system H protein OS=Staphylococcus aureus (strain MSSA476) GN=gcvH PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.809e-18 Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 +V + LKY+ HEWVK EG+VAT GIT++AQ L ++VFVELPET +G F VESVK S++ +PISG+V+EVN Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_STAAR (Glycine cleavage system H protein OS=Staphylococcus aureus (strain MRSA252) GN=gcvH PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.809e-18 Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 +V + LKY+ HEWVK EG+VAT GIT++AQ L ++VFVELPET +G F VESVK S++ +PISG+V+EVN Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVN 80 The following BLAST results are available for this feature:
BLAST of CX300440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300440 ID=CX300440; Name=CX300440; organism=Citrus clementina; type=EST; length=369bpback to top |