CX300440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SHEFN (Glycine cleavage system H protein OS=Shewanella frigidimarina (strain NCIMB 400) GN=gcvH PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.541e-16 Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGSVA-TAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S++ LKYASSHEW++ E + T GIT+HAQ+ L ++VFVELPE G + G V ESVKA SD+ +PISGEVI VN Sbjct: 2 STIPADLKYASSHEWIRKESDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGEDCAVAESVKAASDIYAPISGEVIAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SACD2 (Glycine cleavage system H protein OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gcvH PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.541e-16 Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVK-HEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S + LKY SHEW + E T GITDHAQ+ L +VVFVE+PE G+ G VVESVKA SD+ SP+SGEVI VN Sbjct: 2 SELRSELKYLESHEWARVEEDGTVTIGITDHAQEALGDVVFVEVPEVGSQVSIGEEAGVVESVKAASDIYSPVSGEVIAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_BARBK (Glycine cleavage system H protein OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=gcvH PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.541e-16 Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 1 Query: 154 YASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 + HEW+ EG +AT GIT +AQ+ L ++VFV+LP+ G QG VVESVKA SDV SPI GEV+E+N Sbjct: 6 FTQDHEWLNIEGEIATVGITHYAQEQLGDLVFVDLPQCGTQLSQGDSAAVVESVKAASDVYSPIDGEVVEIN 77
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_VIBVY (Glycine cleavage system H protein OS=Vibrio vulnificus (strain YJ016) GN=gcvH PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.013e-16 Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LK+ SHEWV+ G T GI++HAQ+ L +VVFVELPE A + G F +VESVKA SD+ +P++GEV+EVN Sbjct: 5 LKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPELEAEIEAGESFSLVESVKAASDIYAPVTGEVVEVN 79
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_VIBVU (Glycine cleavage system H protein OS=Vibrio vulnificus GN=gcvH PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.013e-16 Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LK+ SHEWV+ G T GI++HAQ+ L +VVFVELPE A + G F +VESVKA SD+ +P++GEV+EVN Sbjct: 5 LKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPELEAEIEAGESFSLVESVKAASDIYAPVTGEVVEVN 79
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_RALSO (Glycine cleavage system H protein OS=Ralstonia solanacearum GN=gcvH PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.013e-16 Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LKY SHEWV+ E T GITD AQ+ L ++VF+ELP+TG KQG VVESVKA SD+ +P+SGEVI N Sbjct: 8 LKYTESHEWVRTEADGTLTIGITDLAQEQLGDIVFLELPDTGRQVKQGEAIAVVESVKAASDIYAPVSGEVIASN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_METNO (Glycine cleavage system H protein OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=gcvH PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.013e-16 Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 L++ HEW+K +G +AT GIT HA + L ++VFVELP+ GA +G VVESVKA SDV +P+ GEV E+N Sbjct: 2 LRFTEEHEWLKLDGEIATVGITSHAAEQLGDLVFVELPKVGAVLTKGEAAAVVESVKAASDVYAPLDGEVTEIN 75
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_HALMA (Probable glycine cleavage system H protein OS=Haloarcula marismortui GN=gcvH PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.013e-16 Identity = 43/78 (55.13%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 136 VLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 V D L+Y SHEWV+ G A GIT AQD L +VVFVELP+ G G F VVES+KA SDV +P+SG V VN Sbjct: 5 VPDDLRYLESHEWVRVAGDTAEVGITAFAQDELGDVVFVELPDEGTELTAGEDFGVVESIKAVSDVYAPVSGTVTAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_ANASK (Glycine cleavage system H protein OS=Anaeromyxobacter sp. (strain K) GN=gcvH PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.013e-16 Identity = 40/76 (52.63%), Postives = 52/76 (68.42%), Query Frame = 1 Query: 142 DGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 + L+Y HEW + +GS GITD AQ L +VV+VELP+ G K+G F VVES KA S++ +PISG+VIEVN Sbjct: 5 EDLRYTREHEWARRKGSAIVVGITDFAQQQLGDVVYVELPDVGDPVKKGESFGVVESTKAVSELFAPISGKVIEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_ANAD2 (Glycine cleavage system H protein OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=gcvH PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.013e-16 Identity = 40/76 (52.63%), Postives = 52/76 (68.42%), Query Frame = 1 Query: 142 DGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 + L+Y HEW + +GS GITD AQ L +VV+VELP+ G K+G F VVES KA S++ +PISG+VIEVN Sbjct: 5 EDLRYTREHEWARRKGSAIVVGITDFAQQQLGDVVYVELPDVGDPVKKGESFGVVESTKAVSELFAPISGKVIEVN 80 The following BLAST results are available for this feature:
BLAST of CX300440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300440 ID=CX300440; Name=CX300440; organism=Citrus clementina; type=EST; length=369bpback to top |