CX300440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_STACT (Glycine cleavage system H protein OS=Staphylococcus carnosus (strain TM300) GN=gcvH PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.629e-16 Identity = 39/79 (49.37%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 +V + LKY+ HEWVK EG T GIT++AQ L ++VFVELPET ++ F VESVK S++ +P+SG V+E+N Sbjct: 2 AVPEELKYSKEHEWVKVEGDTVTIGITEYAQGELGDIVFVELPETEDDIEESESFGSVESVKTVSELYAPVSGSVVEIN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SHELP (Glycine cleavage system H protein OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gcvH PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.629e-16 Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGSVA-TAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S++ LKYASSHEW++ E + T GI++HAQ+ L ++VFVELPE G S G V ESVKA SD+ +P+SGEV+ VN Sbjct: 2 SNIPTELKYASSHEWIRREEDGSYTVGISEHAQELLGDMVFVELPEVGDSVSAGDDCAVAESVKAASDIYAPVSGEVVAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_METPB (Glycine cleavage system H protein OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=gcvH PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.629e-16 Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 L++ HEW++ +G VAT GIT HA + L ++VFVELP+ G +G VVESVKA SDV +P+SGEV EVN Sbjct: 2 LRFTDEHEWLRLDGDVATVGITAHAAEQLGDLVFVELPKVGVKLTKGEAAAVVESVKAASDVYAPLSGEVTEVN 75
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_METI4 (Glycine cleavage system H protein OS=Methylacidiphilum infernorum (isolate V4) GN=gcvH PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.629e-16 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 1 Query: 154 YASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 Y +HEWV G VAT GIT+HAQ L ++V++ELP+ G F Q VVESVKA SD+ +P+SGE++ VN Sbjct: 9 YTDTHEWVNVSGDVATVGITEHAQRELSDIVYIELPKVGERFNQKAVVGVVESVKAASDLYAPVSGEILAVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_LEPBP (Glycine cleavage system H protein OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=gcvH PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.629e-16 Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 142 DGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 DG Y HEWVK EG VA GITD AQ+ L ++VF++LP+ G K +ESVKA D+ SPISGEV+E N Sbjct: 8 DGYYYTEKHEWVKVEGDVALIGITDFAQNALGDIVFIDLPKPGKQIKAKDSLGTIESVKAAEDLYSPISGEVVETN 83
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_LEPBA (Glycine cleavage system H protein OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=gcvH PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.629e-16 Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 142 DGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 DG Y HEWVK EG VA GITD AQ+ L ++VF++LP+ G K +ESVKA D+ SPISGEV+E N Sbjct: 8 DGYYYTEKHEWVKVEGDVALIGITDFAQNALGDIVFIDLPKPGKQIKAKDSLGTIESVKAAEDLYSPISGEVVETN 83
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_HALLT (Probable glycine cleavage system H protein OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=gcvH PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.629e-16 Identity = 41/78 (52.56%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 136 VLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 V D +Y SHEWV G G++D AQD L +VVFVELPE G G F VVES+KA SD+ +P+SGEV+ VN Sbjct: 5 VPDDRRYLESHEWVTTGGDTVRIGVSDFAQDELGDVVFVELPEAGDEITAGEAFGVVESIKAVSDLYAPVSGEVVAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_BURA4 (Glycine cleavage system H protein OS=Burkholderia ambifaria (strain MC40-6) GN=gcvH PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.629e-16 Identity = 42/81 (51.85%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S+V LKY HEW++ E T GITDHAQ L ++VF+ELP G S G VVESVKA SD+ SP+SGE+I +N Sbjct: 2 SNVPADLKYTDEHEWIRTEADGTLTVGITDHAQSTLGDIVFLELPAVGKSVSAGDAVGVVESVKAASDIYSPVSGEIIAIN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH2_THETN (Glycine cleavage system H protein 2 OS=Thermoanaerobacter tengcongensis GN=gcvH2 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.629e-16 Identity = 42/78 (53.85%), Postives = 52/78 (66.67%), Query Frame = 1 Query: 136 VLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 VL+GL Y+ HEWVK EG GITD+AQ L +V+VELPE G+ G VVESVKA SDV +P+ +V+EVN Sbjct: 3 VLEGLYYSKDHEWVKVEGDKVYIGITDYAQHSLGNIVYVELPEVGSELSAGDVLGVVESVKAASDVYTPVDIKVLEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_COPPD (Glycine cleavage system H protein OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=gcvH PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.434e-16 Identity = 43/79 (54.43%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 136 VLDGLKYASSHEWVKH-EGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 VL+GLKY+ HEWVK E + + GITD AQD L ++VFV LP G K G +ESVK+ SDV SP+SG+V+EVN Sbjct: 3 VLEGLKYSKEHEWVKVLEDNKVSVGITDFAQDELGDIVFVNLPAVGQEIKVGETLASLESVKSASDVYSPVSGKVVEVN 81 The following BLAST results are available for this feature:
BLAST of CX300440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300440 ID=CX300440; Name=CX300440; organism=Citrus clementina; type=EST; length=369bpback to top |