CX300440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_EDWI9 (Glycine cleavage system H protein OS=Edwardsiella ictaluri (strain 93-146) GN=gcvH PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.649e-16 Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVK-HEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S+V LKY +SHEWV+ E V GITDHAQ L ++VFV+LPE GA G V ESVKA SD+ SP++GE++ +N Sbjct: 2 SNVPTELKYTASHEWVRAEENGVFCVGITDHAQSLLGDMVFVDLPEVGAHIDTGAECAVAESVKAASDIYSPLAGEIVAIN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_AERPE (Probable glycine cleavage system H protein OS=Aeropyrum pernix GN=gcvH PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.649e-16 Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 L+Y S EW + E VAT GITD AQ L+++V VELPE G K+G VES+KAT+D+ +P+SGE+++VN Sbjct: 21 LRYTESDEWARLEDGVATVGITDFAQKELKDIVGVELPEKGRKVKKGEAVATVESIKATADIYAPLSGEIVDVN 94
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_VIBCM (Glycine cleavage system H protein OS=Vibrio cholerae serotype O1 (strain M66-2) GN=gcvH PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.990e-16 Identity = 41/75 (54.67%), Postives = 52/75 (69.33%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LK+ SHEWV+ G T GI++HAQ+ L +VVFVELPE A G F +VESVKA SD+ +P++G VIEVN Sbjct: 5 LKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPEIDAEIDAGDSFSLVESVKAASDIYAPVTGVVIEVN 79
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_VIBCH (Glycine cleavage system H protein OS=Vibrio cholerae GN=gcvH PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.990e-16 Identity = 41/75 (54.67%), Postives = 52/75 (69.33%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LK+ SHEWV+ G T GI++HAQ+ L +VVFVELPE A G F +VESVKA SD+ +P++G VIEVN Sbjct: 5 LKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPEIDAEIDAGDSFSLVESVKAASDIYAPVTGVVIEVN 79
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_VIBC3 (Glycine cleavage system H protein OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gcvH PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.990e-16 Identity = 41/75 (54.67%), Postives = 52/75 (69.33%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LK+ SHEWV+ G T GI++HAQ+ L +VVFVELPE A G F +VESVKA SD+ +P++G VIEVN Sbjct: 5 LKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPEIDAEIDAGDSFSLVESVKAASDIYAPVTGVVIEVN 79
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_STRM5 (Glycine cleavage system H protein OS=Stenotrophomonas maltophilia (strain R551-3) GN=gcvH PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.990e-16 Identity = 43/81 (53.09%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGSV-ATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S + LK+ SHEW + EG+ T GI+DHAQ L ++V+VELPE GA+ K VVESVKA SDV SP+SG ++EVN Sbjct: 2 SEIPGDLKFLKSHEWARVEGNGRVTVGISDHAQGLLGDLVYVELPEVGATAKANEQIAVVESVKAASDVYSPVSGTIVEVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_STAHJ (Glycine cleavage system H protein OS=Staphylococcus haemolyticus (strain JCSC1435) GN=gcvH PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.990e-16 Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LKY+ HEWVK EG+ T GIT++AQ L ++VFVELPE +G F VESVK S++ +P+SG+V+E N Sbjct: 7 LKYSKEHEWVKVEGNTVTIGITEYAQGELGDIVFVELPEVDDEINEGDTFGSVESVKTVSELYAPVSGKVVESN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SHEPW (Glycine cleavage system H protein OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=gcvH PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.990e-16 Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWV-KHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S++ LKYASSHEWV K E T GI++HAQ+ L ++VFVELPE G G V ESVKA SD+ SP++GEV+ VN Sbjct: 2 SNIPAELKYASSHEWVRKEEDGSYTVGISEHAQELLGDMVFVELPEVGDDVNAGEDCAVAESVKAASDIYSPLTGEVLAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SHEPA (Glycine cleavage system H protein OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gcvH PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.990e-16 Identity = 43/81 (53.09%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWV-KHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S++ LKYASSHEW+ K E T GI++HAQ+ L ++VFVELPE G G V ESVKA SD+ +P+SGEV+ VN Sbjct: 2 SNIPAELKYASSHEWIRKEEDGSYTVGISEHAQELLGDMVFVELPEVGDDVNAGEDCAVAESVKAASDIYAPLSGEVVAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_PROMH (Glycine cleavage system H protein OS=Proteus mirabilis (strain HI4320) GN=gcvH PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.990e-16 Identity = 41/81 (50.62%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGSVA-TAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S + LKYA SHEW++ EG+ T GIT+HAQ+ L ++VFV+LP+ G+ G V ESVKA SD+ +P+SGE+I VN Sbjct: 2 SQIPSELKYAQSHEWIRSEGNGEYTIGITEHAQELLGDMVFVDLPDVGSEVDLGDDCAVAESVKAASDIYAPLSGEIIAVN 82 The following BLAST results are available for this feature:
BLAST of CX300440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300440 ID=CX300440; Name=CX300440; organism=Citrus clementina; type=EST; length=369bpback to top |