CX300440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_ACIBT (Glycine cleavage system H protein OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=gcvH PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 4.791e-18 Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LKYA +HEWVK EG + GITDHAQD L ++V+VE PE G+ G VVESVK SD+++P+SG V+EVN Sbjct: 7 LKYARTHEWVKIEGDLVITGITDHAQDELGDLVYVETPEVGSQVTAGEQAGVVESVKTASDIHAPVSGTVVEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_ACIBC (Glycine cleavage system H protein OS=Acinetobacter baumannii (strain ACICU) GN=gcvH PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.791e-18 Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LKYA +HEWVK EG + GITDHAQD L ++V+VE PE G+ G VVESVK SD+++P+SG V+EVN Sbjct: 7 LKYARTHEWVKIEGDLVITGITDHAQDELGDLVYVETPEVGSQVTAGEQAGVVESVKTASDIHAPVSGTVVEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_ACIB5 (Glycine cleavage system H protein OS=Acinetobacter baumannii (strain AB0057) GN=gcvH PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.791e-18 Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LKYA +HEWVK EG + GITDHAQD L ++V+VE PE G+ G VVESVK SD+++P+SG V+EVN Sbjct: 7 LKYARTHEWVKIEGDLVITGITDHAQDELGDLVYVETPEVGSQVTAGEQAGVVESVKTASDIHAPVSGTVVEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_ACIB3 (Glycine cleavage system H protein OS=Acinetobacter baumannii (strain AB307-0294) GN=gcvH PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.791e-18 Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LKYA +HEWVK EG + GITDHAQD L ++V+VE PE G+ G VVESVK SD+++P+SG V+EVN Sbjct: 7 LKYARTHEWVKIEGDLVITGITDHAQDELGDLVYVETPEVGSQVTAGEQAGVVESVKTASDIHAPVSGTVVEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_THEP3 (Glycine cleavage system H protein OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gcvH PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.257e-18 Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 136 VLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 V++GL Y+ HEWVK EG A GITD+AQ L +V++ELPE GA G VVESVKA SDV +P+ G+V+EVN Sbjct: 3 VIEGLYYSKDHEWVKVEGDKAYIGITDYAQHSLGNIVYIELPEVGAELSAGDVLGVVESVKAASDVYTPVDGKVLEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_MARMS (Glycine cleavage system H protein OS=Marinomonas sp. (strain MWYL1) GN=gcvH PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.257e-18 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S++ + LKYA SHEWV G T GITDHAQD L +VV+VELPE G F +VESVKA SD+ +P++GEVIEVN Sbjct: 2 STIPENLKYADSHEWVLDNGDGTVTVGITDHAQDLLGDVVYVELPEVGTEVTATEQFSLVESVKAASDIYAPVNGEVIEVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_ACIBS (Glycine cleavage system H protein OS=Acinetobacter baumannii (strain SDF) GN=gcvH PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.257e-18 Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LKYA +HEWVK EG + GITDHAQD L ++V+VE PE G+ G VVESVK SD+++P+SG V+EVN Sbjct: 7 LKYARTHEWVKIEGDLVITGITDHAQDELGDLVYVETPEVGSQVTAGEQARVVESVKTASDIHAPVSGTVVEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_PARL1 (Glycine cleavage system H protein OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=gcvH PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.172e-18 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 139 LDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 + +++ HEWV+ +G +AT GITD+AQ+ L +VVFVELPE G G VVESVKA S+V SP+SGEVI+VN Sbjct: 1 MSDIRFTDQHEWVRVDGDIATIGITDYAQEQLGDVVFVELPEVGKDIAAGDEAAVVESVKAASEVYSPVSGEVIDVN 77
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_ERWCT (Glycine cleavage system H protein OS=Erwinia carotovora subsp. atroseptica GN=gcvH PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.067e-17 Identity = 45/81 (55.56%), Postives = 58/81 (71.60%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S+V LKYA+SHEWV HEG + + GIT+HAQ+ L ++VF++LPE G G V ESVKA SD+ +PISGEV+EVN Sbjct: 2 SNVPTELKYATSHEWVLHEGDGIYSVGITEHAQELLGDMVFIDLPEVGTVVAAGDDCAVAESVKAASDIYAPISGEVVEVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_STAAT (Glycine cleavage system H protein OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=gcvH PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.394e-17 Identity = 43/79 (54.43%), Postives = 57/79 (72.15%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 +V + LKY+ HEWVK EG+VA GIT++AQ L ++VFVELPET +G F VESVK S++ +PISG+V+EVN Sbjct: 2 AVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVN 80 The following BLAST results are available for this feature:
BLAST of CX300440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300440 ID=CX300440; Name=CX300440; organism=Citrus clementina; type=EST; length=369bpback to top |