CX300440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_CYTH3 (Glycine cleavage system H protein OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=gcvH PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LKY+ HEWV+ EG A GITD AQ L ++V++++ G + + F +E+VK SD+ P+SGEV+E N Sbjct: 7 LKYSKDHEWVRVEGQTAYVGITDFAQKELGDIVYLDVTSVGQTIDKEAIFGTIEAVKTVSDLFMPVSGEVLEFN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH1_PSESM (Glycine cleavage system H protein 1 OS=Pseudomonas syringae pv. tomato GN=gcvH1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12 Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 1 Query: 148 LKYASSHEWVKHE--GSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 L++ + HEW++ E GSV T GIT +AQ+ L +VVFV+LPE A + Q VVESVKA S +N P+ GEV+EVN Sbjct: 4 LRFTADHEWLRAEADGSV-TVGITPYAQESLGDVVFVQLPELQA-YAQHAEVSVVESVKAASSINMPLDGEVVEVN 77
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_PSYIN (Glycine cleavage system H protein OS=Psychromonas ingrahamii (strain 37) GN=gcvH PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.008e-12 Identity = 34/75 (45.33%), Postives = 52/75 (69.33%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVA-TAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 L + +HEW+ G + T GI++ AQ L +VVFV++PE G + + G F +VESVKA SD+ +P++GE+IE+N Sbjct: 5 LMFTDTHEWILDNGDGSVTIGISNQAQQLLGDVVFVDMPEVGDNTQAGETFSLVESVKAASDLYAPVTGEIIEIN 79
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_MYCS2 (Glycine cleavage system H protein OS=Mycobacterium smegmatis GN=gcvH PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.008e-12 Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S + L Y S HEWV G GITD+AQ L +VVFV+LP+ GA G F VES K+ SD+ +P++ +V+ VN Sbjct: 2 SEIPADLYYTSEHEWVLRTGDDTVRVGITDYAQSALGDVVFVQLPDVGADVASGDAFGEVESTKSVSDLYAPVTAKVVAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_GRAFK (Glycine cleavage system H protein OS=Gramella forsetii (strain KT0803) GN=gcvH PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.008e-12 Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LKY HEWVK +G T G+TD AQ L ++V+VE+ + + F VE+VK SD+ P+SGE+IE N Sbjct: 7 LKYTKDHEWVKIDGDTVTIGVTDFAQGELGDIVYVEVETLDETLDKEEVFGTVEAVKTVSDLYMPVSGEIIEFN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_CLAMS (Glycine cleavage system H protein OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=gcvH PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.008e-12 Identity = 35/74 (47.30%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 L+Y + HEWV +G VAT GIT +A D L +VVFVELP G G +ES K+ ++ +PI G V EVN Sbjct: 7 LQYTAEHEWVLIDGDVATVGITSYAADKLGDVVFVELPAVGDELAGGSVVGEIESTKSVGELFAPIDGTVTEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_STRAW (Glycine cleavage system H protein OS=Streptomyces avermitilis GN=gcvH PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12 Identity = 34/75 (45.33%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 148 LKYASSHEWVKH-EGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 L+Y+ HEW+ E V+T GIT+HA + L +VV+V+LPE G + G +ES K+ SD+ SP++GEV+E N Sbjct: 7 LRYSKEHEWLSGAEDGVSTVGITEHAANALGDVVYVQLPEVGDTVTAGETCGELESTKSVSDLYSPVTGEVVEAN 81
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_PROMM (Glycine cleavage system H protein OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvH PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12 Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 142 DGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 D ++A +HE+ +G + GI+ A D L ++VFV+LPE G +G F VESVKA D+++PISGE++ +N Sbjct: 7 DHFRFADTHEYASLDGELVRIGISAFAVDQLGDIVFVDLPEVGDRLNRGTTFGSVESVKAVEDLHAPISGELVRIN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_PROM3 (Glycine cleavage system H protein OS=Prochlorococcus marinus (strain MIT 9303) GN=gcvH PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12 Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 142 DGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 D ++A +HE+ +G + GI+ A D L ++VFV+LPE G +G F VESVKA D+++PISGE++ +N Sbjct: 7 DHFRFADTHEYASLDGDLVRVGISAFAVDQLGDIVFVDLPEVGDLLNRGTTFGSVESVKAVEDLHAPISGELVRIN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_POLNS (Glycine cleavage system H protein OS=Polynucleobacter necessarius (strain STIR1) GN=gcvH PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12 Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 142 DGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 D K+A +HEW E + GI++HAQ+ L +V+F + P+ KQG V+ESVKA SD+++P+SGE++ +N Sbjct: 5 DTFKFAETHEWADQEDDGLIWVGISNHAQEALGDVMFFQAPKLDQQVKQGEAIAVIESVKAASDIHAPVSGEIVALN 81 The following BLAST results are available for this feature:
BLAST of CX300440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300440 ID=CX300440; Name=CX300440; organism=Citrus clementina; type=EST; length=369bpback to top |