CX300440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_MYCSK (Glycine cleavage system H protein OS=Mycobacterium sp. (strain KMS) GN=gcvH PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11 Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 L Y HEWV G GITD+AQ L +VVFV+LP+ GA G F VES K+ SD+ +P+S +V+ VN Sbjct: 8 LYYTDEHEWVLRTGDDTLRVGITDYAQAALGDVVFVQLPDVGAELTSGESFGEVESTKSVSDLYAPVSAKVLAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_MYCSJ (Glycine cleavage system H protein OS=Mycobacterium sp. (strain JLS) GN=gcvH PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11 Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 L Y HEWV G GITD+AQ L +VVFV+LP+ GA G F VES K+ SD+ +P+S +V+ VN Sbjct: 8 LYYTDEHEWVLRTGDDTLRVGITDYAQAALGDVVFVQLPDVGAELTSGESFGEVESTKSVSDLYAPVSAKVLAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_DESVM (Glycine cleavage system H protein OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=gcvH PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.950e-11 Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S+ L Y +HEWV+ EG A GIT AQ+ L ++ FV+LP G + G VESVKA S++ SP++G V VN Sbjct: 2 SIPADLLYTDTHEWVRIEGDEAVIGITQFAQEQLGDLTFVDLPAVGDTLATGQEMGSVESVKAASELYSPLAGTVSAVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SALRD (Glycine cleavage system H protein OS=Salinibacter ruber (strain DSM 13855) GN=gcvH PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.546e-11 Identity = 32/76 (42.11%), Postives = 42/76 (55.26%), Query Frame = 1 Query: 142 DGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 D L Y HEW++ E AT GITD AQ L ++VFVEL G Q F VE+VK S++ P+ G + +N Sbjct: 5 DDLYYTDDHEWLRVENGTATVGITDFAQSELGDIVFVELEPEGTKLGQDDIFGTVEAVKTVSELYMPVGGTITAIN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_MYCGI (Glycine cleavage system H protein OS=Mycobacterium gilvum (strain PYR-GCK) GN=gcvH PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.326e-11 Identity = 34/81 (41.98%), Postives = 48/81 (59.26%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S + L Y HEWV+ G GITD+AQ L +VVFV+LP+ A+ G F VES K+ SD+ +P++ +V+ VN Sbjct: 2 SEIPADLSYTEEHEWVQRTGDDTVRVGITDYAQAALGDVVFVQLPDVDAALTAGESFGEVESTKSVSDLYAPLTAKVVAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH4_AQUAE (Glycine cleavage system H protein 4 OS=Aquifex aeolicus GN=gcvH4 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.326e-11 Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 154 YASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 Y HEWV+ + A GITD+AQ L ++V+V+LPE G G +ESVK + V +P++G V+EVN Sbjct: 17 YTKEHEWVRVKNGFAEVGITDYAQKQLGDIVYVDLPEKGKEVDAGDTLANIESVKNVAPVYAPVTGTVVEVN 88
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_YEAST (Glycine cleavage system H protein, mitochondrial OS=Saccharomyces cerevisiae GN=GCV3 PE=1 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 4.343e-11 Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 1 Query: 148 LKYASSHEWVK-HEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 ++Y S HEW+ H+ A GIT +A D L + +VELPE G QG +ESVK+ S++ P G V E+N Sbjct: 45 VRYTSQHEWIAVHQDKTAFVGITKYATDSLGDATYVELPEVGTEISQGESLGSIESVKSASEIYQPADGTVEEIN 119
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_VESOH (Glycine cleavage system H protein OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=gcvH PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.409e-11 Identity = 37/81 (45.68%), Postives = 45/81 (55.56%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S + D +Y +HEW+ G T GITDHAQ L ++VFVELP F VVESVKA S V SP ++IE N Sbjct: 2 SEIRDDRQYTQTHEWILDNGDDTYTMGITDHAQALLGDMVFVELPNVDDEVSIDDEFCVVESVKAASGVYSPADLQIIEAN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH1_SULSO (Probable glycine cleavage system H protein 1 OS=Sulfolobus solfataricus GN=gcvH1 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.409e-11 Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 1 Query: 136 VLDGLKYASSHEWVK-HEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 VL Y + EWV +VA GITD+AQ L ++V +ELP+ K G V+ESVKA +D+ SP+SG ++EVN Sbjct: 11 VLTDRLYTETDEWVVLSNDNVAVIGITDYAQKKLRDIVGIELPQLQKEVKAGESVGVIESVKAAADIFSPLSGIIVEVN 89
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_THEFY (Glycine cleavage system H protein OS=Thermobifida fusca (strain YX) GN=gcvH PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.676e-11 Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 1 Query: 133 SVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 SV L Y HEWV +AT GIT A + L ++V+VE PE G++ G +ES K+ S++ SP+ GEV++VN Sbjct: 2 SVPAELGYTKEHEWVAINEGIATVGITAFAAEALGDIVYVEPPEVGSTVTAGESCGEIESHKSVSELYSPVDGEVVDVN 80 The following BLAST results are available for this feature:
BLAST of CX300440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300440 ID=CX300440; Name=CX300440; organism=Citrus clementina; type=EST; length=369bpback to top |