CX300440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_ACIAD (Glycine cleavage system H protein OS=Acinetobacter sp. (strain ADP1) GN=gcvH PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.821e-17 Identity = 40/74 (54.05%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LKYA++HEWV+ EG + GI+DHAQD L ++V+VE+PE G+ G VVESVK SD+++P+SG V+EVN Sbjct: 7 LKYATTHEWVRIEGDLIVTGISDHAQDALGDLVYVEVPEVGSHMTAGTQAGVVESVKTASDIHAPVSGTVVEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_THEVO (Probable glycine cleavage system H protein OS=Thermoplasma volcanium GN=gcvH PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.106e-17 Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 ++V DGLKY +HEW K + +AT GITD+AQ + ++V+V+LPE G K G +ESVK+ DV SP++GE+ EVN Sbjct: 2 TNVPDGLKYTKTHEWYKVDNGIATVGITDYAQSQMTDIVYVDLPEVGDKKKVGDVLLTIESVKSAEDVYSPLTGEITEVN 81
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SINMW (Glycine cleavage system H protein OS=Sinorhizobium medicae (strain WSM419) GN=gcvH PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.106e-17 Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LK+ HEW+K +G VAT GIT+HA L ++VFVELPE G++F +G VESVKA SDV P+ GE++E N Sbjct: 2 LKFTEEHEWLKIDGDVATVGITEHAAGQLGDLVFVELPEAGSTFSKGDTAATVESVKAASDVYCPLDGEIVEAN 75
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_CAUCR (Glycine cleavage system H protein OS=Caulobacter crescentus GN=gcvH PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.106e-17 Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 +++ HEWV EG VAT GIT +A + L +VVFVE PE G KQG G VVESVKA SDV +P+SGEVIE N Sbjct: 1 MRFTKDHEWVIVEGDVATVGITAYAAEQLGDVVFVETPEAGKVVKQGEGLAVVESVKAASDVYAPVSGEVIEGN 74
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_CAUCN (Glycine cleavage system H protein OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=gcvH PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.106e-17 Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 +++ HEWV EG VAT GIT +A + L +VVFVE PE G KQG G VVESVKA SDV +P+SGEVIE N Sbjct: 1 MRFTKDHEWVIVEGDVATVGITAYAAEQLGDVVFVETPEAGKVVKQGEGLAVVESVKAASDVYAPVSGEVIEGN 74
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_BRUSU (Glycine cleavage system H protein OS=Brucella suis GN=gcvH PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.106e-17 Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 154 YASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 + HEW+ E VAT GIT HAQ+ L ++VFVELPE G + +G G VVESVKA SDV +P+ GEV+EVN Sbjct: 9 FTEDHEWINVENGVATVGITIHAQEQLGDLVFVELPEVGRTVAKGDGVVVVESVKAASDVYAPVDGEVVEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_BRUME (Glycine cleavage system H protein OS=Brucella melitensis GN=gcvH PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.106e-17 Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 154 YASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 + HEW+ E VAT GIT HAQ+ L ++VFVELPE G + +G G VVESVKA SDV +P+ GEV+EVN Sbjct: 9 FTEDHEWINVENGVATVGITIHAQEQLGDLVFVELPEVGRTVAKGDGVVVVESVKAASDVYAPVDGEVVEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_BRUA2 (Glycine cleavage system H protein OS=Brucella abortus (strain 2308) GN=gcvH PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.106e-17 Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 154 YASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 + HEW+ E VAT GIT HAQ+ L ++VFVELPE G + +G G VVESVKA SDV +P+ GEV+EVN Sbjct: 9 FTEDHEWINVENGVATVGITIHAQEQLGDLVFVELPEVGRTVAKGDGVVVVESVKAASDVYAPVDGEVVEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_YERE8 (Glycine cleavage system H protein OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gcvH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.056e-17 Identity = 45/81 (55.56%), Postives = 58/81 (71.60%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S+V LKYASSHEWV+ +G V + GIT+HAQ+ L ++VFV+LPE G+ G V ESVKA SD+ +PISGE+I VN Sbjct: 2 SNVPADLKYASSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSEVSAGSDCAVAESVKAASDIYAPISGEIIAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SYMTH (Glycine cleavage system H protein OS=Symbiobacterium thermophilum GN=gcvH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.056e-17 Identity = 42/74 (56.76%), Postives = 51/74 (68.92%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LKY+ HEW++ EG++ GIT AQD L +VVFVELPE G KQ F VVESVK SD+ P SG+V+EVN Sbjct: 8 LKYSKEHEWIRVEGNIGIVGITWFAQDQLGDVVFVELPEVGRELKQNEQFGVVESVKTVSDLYCPASGKVVEVN 81 The following BLAST results are available for this feature:
BLAST of CX300440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300440 ID=CX300440; Name=CX300440; organism=Citrus clementina; type=EST; length=369bpback to top |