CX300440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_STAES (Glycine cleavage system H protein OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gcvH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.056e-17 Identity = 40/73 (54.79%), Postives = 54/73 (73.97%), Query Frame = 1 Query: 151 KYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 KY+ HEWVK E +VAT GIT++AQ+ L ++VFVELPET +G F VESVK S++ +PISG+++EVN Sbjct: 8 KYSKEHEWVKIENNVATVGITEYAQNELGDIVFVELPETDDELNEGDTFGSVESVKTVSELYAPISGKIVEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_RHILO (Glycine cleavage system H protein OS=Rhizobium loti GN=gcvH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.056e-17 Identity = 40/72 (55.56%), Postives = 52/72 (72.22%), Query Frame = 1 Query: 154 YASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 + S HEW++ EG +AT GITD+AQ+ L ++VFVELPETG +G VVESVKA SDV +P+ GE+ E N Sbjct: 9 FTSDHEWLRVEGGIATVGITDYAQEQLGDLVFVELPETGKKLTKGDTAVVVESVKAASDVYAPVDGEITEAN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_BURCH (Glycine cleavage system H protein OS=Burkholderia cenocepacia (strain HI2424) GN=gcvH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.056e-17 Identity = 44/81 (54.32%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S+V LKY HEW++ E T GITDHAQ L ++VF+ELPE G S G VVESVKA SD+ SP+SGEV+ VN Sbjct: 2 SNVPADLKYTDEHEWIRTEADGTLTVGITDHAQSTLGDIVFLELPEVGKSVNAGDAVGVVESVKAASDIYSPVSGEVVAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_BURCA (Glycine cleavage system H protein OS=Burkholderia cenocepacia (strain AU 1054) GN=gcvH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.056e-17 Identity = 44/81 (54.32%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S+V LKY HEW++ E T GITDHAQ L ++VF+ELPE G S G VVESVKA SD+ SP+SGEV+ VN Sbjct: 2 SNVPADLKYTDEHEWIRTEADGTLTVGITDHAQSTLGDIVFLELPEVGKSVNAGDAVGVVESVKAASDIYSPVSGEVVAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_STAEQ (Glycine cleavage system H protein OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gcvH PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.297e-17 Identity = 40/73 (54.79%), Postives = 54/73 (73.97%), Query Frame = 1 Query: 151 KYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 KY+ HEWVK E +VAT GIT++AQ+ L ++VFVELPET +G F VESVK S++ +PISG+++EVN Sbjct: 8 KYSKEHEWVKIENNVATIGITEYAQNELGDIVFVELPETDDELNEGDTFGSVESVKTVSELYAPISGKIVEVN 80
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_PECCP (Glycine cleavage system H protein OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=gcvH PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.297e-17 Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S+V LKY +SHEWV HEG + + GIT+HAQ+ L ++VF++LPE G G V ESVKA SD+ +PISGE++EVN Sbjct: 2 SNVPAELKYTTSHEWVLHEGGGIYSVGITEHAQELLGDMVFIDLPEVGTVVAAGDDCAVAESVKAASDIYAPISGEIVEVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_CHRSD (Glycine cleavage system H protein OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gcvH PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.297e-17 Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S + L+Y SHEWV G T GITDHAQ+ L +VVFVELPETG G F V+ESVKA SD+ P+SGE+I VN Sbjct: 2 SHIPANLRYTDSHEWVLDNGDGTVTIGITDHAQEALGDVVFVELPETGRELDAGEEFGVIESVKAASDLYLPLSGEIIAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_CARHZ (Glycine cleavage system H protein OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=gcvH PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.297e-17 Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S V LKY+ HEW+K +G++ GITD AQ L ++VF+ELP G G F VVESVKA SD+ +P+SG+V+EVN Sbjct: 2 SVVPKDLKYSREHEWIKVDGNIGIIGITDFAQKSLGDIVFIELPGVGDEISAGDSFGVVESVKAASDLYAPVSGKVVEVN 81
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_BURM1 (Glycine cleavage system H protein OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=gcvH PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.297e-17 Identity = 42/81 (51.85%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S+V LKY HEW++ E T GITDHAQ L ++VF+ELPE G G VVESVKA SD+ SP+SGE++E+N Sbjct: 2 SNVPADLKYTEEHEWIRTEADGTLTVGITDHAQSTLGDIVFLELPEVGKQVTAGDAVGVVESVKAASDIYSPVSGEIVEIN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_BRAJA (Glycine cleavage system H protein OS=Bradyrhizobium japonicum GN=gcvH PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.297e-17 Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 1 Query: 154 YASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 Y S HEW+ EG VAT GITD+AQ L +VVF+ELP+ G + K+ VVESVKA SDV +P++GEV+E N Sbjct: 6 YTSDHEWLAIEGDVATVGITDYAQSQLGDVVFIELPKLGRALKKAEAAAVVESVKAASDVYAPVTGEVLETN 77 The following BLAST results are available for this feature:
BLAST of CX300440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300440 ID=CX300440; Name=CX300440; organism=Citrus clementina; type=EST; length=369bpback to top |