CX300440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_TERTT (Glycine cleavage system H protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.918e-17 Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVK-HEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S + LKY SSHEW + E T GITDHAQ+ L +VVFVE PE G+ G VVESVKA SD+ SP++GEVI VN Sbjct: 2 SEIRSELKYLSSHEWARVEEDGTVTIGITDHAQEALGDVVFVETPEVGSQVSAGEEAGVVESVKAASDIYSPVTGEVIAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SODGM (Glycine cleavage system H protein OS=Sodalis glossinidius (strain morsitans) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.918e-17 Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S+V LKY +SHEWV +EG V GIT+HAQ+ L ++VF++LPE GA+F G V ESVKA SD+ +PISGE++ VN Sbjct: 2 SNVPTELKYTASHEWVLNEGDGVYCVGITEHAQELLGDMVFMDLPEVGATFSAGEDCAVAESVKAASDIYAPISGEIVAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SHESR (Glycine cleavage system H protein OS=Shewanella sp. (strain MR-7) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.918e-17 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWV-KHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S++ LKYASSHEW+ K E T GIT+HAQ+ L ++VFVELPE G + G V ESVKA SD+ +PISGEVI VN Sbjct: 2 SNIPTELKYASSHEWIRKEEDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGNDCAVAESVKAASDIYAPISGEVIAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_ERWT9 (Glycine cleavage system H protein OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.918e-17 Identity = 43/81 (53.09%), Postives = 59/81 (72.84%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGSVA-TAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S+V + LKY SHEWV+ E + + GIT+HAQ+ L ++VFV+LPE G ++QG V ESVKA SD+ +P+SGE+IEVN Sbjct: 2 SNVPNELKYRDSHEWVRKEADGSYSVGITEHAQELLGDMVFVDLPEVGNHYRQGDDCAVAESVKAASDIYAPLSGEIIEVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_BURCC (Glycine cleavage system H protein OS=Burkholderia cenocepacia (strain MC0-3) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.918e-17 Identity = 42/81 (51.85%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S+V LKY HEW++ E T GITDHAQ L ++VF+ELPE G S G VVESVKA SD+ SP+SGE++ +N Sbjct: 2 SNVPADLKYTDEHEWIRTEADGTLTVGITDHAQSTLGDIVFLELPEVGKSVNAGDAVGVVESVKAASDIYSPVSGEIVAIN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_ALTMD (Glycine cleavage system H protein OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.918e-17 Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S++ L+YA++HEWV+ EG V T GI++HAQ L ++VFVELP+ G + G V ESVKA SDV +PISGEV+EVN Sbjct: 2 SNIPTDLRYAATHEWVRPEGDGVFTVGISEHAQGLLGDMVFVELPDVGDAVSTGDDICVAESVKAASDVYAPISGEVVEVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_XANP2 (Glycine cleavage system H protein OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 139 LDGLKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 + ++Y HE+V+ EG VA GI+D+AQ L +VVFVELPE G +GG VVESVKA S+V +P+SGEV+EVN Sbjct: 1 MTSVRYTKDHEYVRVEGDVAVVGISDYAQQQLGDVVFVELPEIGKVVTKGGEAAVVESVKAASEVYAPLSGEVVEVN 77
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_STRMK (Glycine cleavage system H protein OS=Stenotrophomonas maltophilia (strain K279a) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGSV-ATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S + LK+ SHEW + EG+ T GI+DHAQ L ++V+VELPE GA K G VVESVKA SDV SPISG+V+EVN Sbjct: 2 SEIPGDLKFLKSHEWARVEGNGRVTVGISDHAQGLLGDLVYVELPEVGADAKAGEQIAVVESVKAASDVYSPISGKVVEVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SHESW (Glycine cleavage system H protein OS=Shewanella sp. (strain W3-18-1) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWV-KHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S++ LKYASSHEW+ K E T GIT+HAQ+ L ++VFVELPE G + G V ESVKA SD+ +PISGEVI VN Sbjct: 2 SNIPTELKYASSHEWIRKEEDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGDDCAVAESVKAASDIYAPISGEVIAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SHESM (Glycine cleavage system H protein OS=Shewanella sp. (strain MR-4) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWV-KHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S++ LKYASSHEW+ K E T GIT+HAQ+ L ++VFVELPE G + G V ESVKA SD+ +PISGEVI VN Sbjct: 2 SNIPTELKYASSHEWIRKEEDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGDDCAVAESVKAASDIYAPISGEVIAVN 82 The following BLAST results are available for this feature:
BLAST of CX300440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300440 ID=CX300440; Name=CX300440; organism=Citrus clementina; type=EST; length=369bpback to top |