CX300440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SHESA (Glycine cleavage system H protein OS=Shewanella sp. (strain ANA-3) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWV-KHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S++ LKYASSHEW+ K E T GIT+HAQ+ L ++VFVELPE G + G V ESVKA SD+ +PISGEVI VN Sbjct: 2 SNIPTELKYASSHEWIRKEEDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGDDCAVAESVKAASDIYAPISGEVIAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SHEPC (Glycine cleavage system H protein OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWV-KHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S++ LKYASSHEW+ K E T GIT+HAQ+ L ++VFVELPE G + G V ESVKA SD+ +PISGEVI VN Sbjct: 2 SNIPTELKYASSHEWIRKEEDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGDDCAVAESVKAASDIYAPISGEVIAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SHEON (Glycine cleavage system H protein OS=Shewanella oneidensis GN=gcvH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWV-KHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S++ LKYASSHEW+ K E T GIT+HAQ+ L ++VFVELPE G + G V ESVKA SD+ +PISGEVI VN Sbjct: 2 SNIPTELKYASSHEWIRKEEDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGDDCAVAESVKAASDIYAPISGEVIAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_SHEAM (Glycine cleavage system H protein OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17 Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWV-KHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S++ LKYASSHEW+ K + T GIT+HAQ+ L ++VFVELPE G + G V ESVKA SD+ +PISGEVI VN Sbjct: 2 SNIPSELKYASSHEWIRKEDDGTYTVGITEHAQELLGDMVFVELPEVGDTVSAGEDCAVAESVKAASDIYAPISGEVIAVN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_PELUB (Glycine cleavage system H protein OS=Pelagibacter ubique GN=gcvH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17 Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 +KY+ HEW+K +G A GIT HA + L ++VFVELPE G+S + G VVES KA SD+ +P+SGE+IE N Sbjct: 4 VKYSKEHEWIKLDGDTAVVGITQHATEMLGDIVFVELPEIGSSVVKDGNAGVVESTKAASDIYTPVSGEIIENN 77
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_METEP (Glycine cleavage system H protein OS=Methylobacterium extorquens (strain PA1) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17 Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 L++ HEW++ +G VAT GIT HA + L ++VFVELP+ GA +G VVESVKA SDV +P+SGEV EVN Sbjct: 2 LRFTDEHEWLRLDGDVATVGITAHAAEQLGDLVFVELPKVGAKLTKGEAAAVVESVKAASDVYAPLSGEVTEVN 75
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_METC4 (Glycine cleavage system H protein OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17 Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 L++ HEW++ +G VAT GIT HA + L ++VFVELP+ GA +G VVESVKA SDV +P+SGEV EVN Sbjct: 2 LRFTDEHEWLRLDGDVATVGITAHAAEQLGDLVFVELPKVGAKLTKGEAAAVVESVKAASDVYAPLSGEVTEVN 75
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_BURVG (Glycine cleavage system H protein OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17 Identity = 43/81 (53.09%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S+V LKY HEWV+ E T GITDHAQ L ++VF+ELP+ G S G VVESVKA SD+ SP+SGEV+ +N Sbjct: 2 SNVPADLKYTDEHEWVRTEADGTLTVGITDHAQSTLGDIVFLELPQVGKSVNAGDAVGVVESVKAASDIYSPVSGEVVAIN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_BURCJ (Glycine cleavage system H protein OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17 Identity = 42/81 (51.85%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 130 SSVLDGLKYASSHEWVKHEGS-VATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 S+V LKY HEW++ E T GITDHAQ L ++VF+ELPE G S G VVESVKA SD+ SP+SGE++ +N Sbjct: 2 SNVPAELKYTDEHEWIRTEADGTLTVGITDHAQSTLGDIVFLELPEVGKSVNAGDAVGVVESVKAASDIYSPVSGEIVAIN 82
BLAST of CX300440 vs. ExPASy Swiss-Prot
Match: GCSH_AGRRK (Glycine cleavage system H protein OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.036e-17 Identity = 41/74 (55.41%), Postives = 50/74 (67.57%), Query Frame = 1 Query: 148 LKYASSHEWVKHEGSVATAGITDHAQDHLEEVVFVELPETGASFKQGGGFWVVESVKATSDVNSPISGEVIEVN 369 LK+ HEW+ EG VAT GIT HA L ++VFVELPE GASF +G VESVKA S+V P+ GE+ E+N Sbjct: 2 LKFTEEHEWLNIEGDVATVGITAHAAGQLGDLVFVELPEVGASFSKGDDAATVESVKAASEVYCPLDGEITEIN 75 The following BLAST results are available for this feature:
BLAST of CX300440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300440 ID=CX300440; Name=CX300440; organism=Citrus clementina; type=EST; length=369bpback to top |