CX300441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_STRAW (50S ribosomal protein L14 OS=Streptomyces avermitilis GN=rplN PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12 Identity = 44/99 (44.44%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + I V G GR A +GD+++ATVK P K V+ AVIVR K RR DG ++ F++NA VI+ G+ +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKKGDVVKAVIVRTVKERRRPDGSYIRFDENAAVILKNDGDPRGTRIFGPVGRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_RUBXD (50S ribosomal protein L14 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rplN PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12 Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GA++L I V G R SA +GD+++A+VK+ P K V+ AV+VR +K RR+DG ++ F +NAGV++N G +G+ I GP+ +E Sbjct: 11 ADNSGARSLLCIRVLGGSKRR----SAGIGDVIVASVKEATPGGAVKKGDVVRAVVVRTKKETRREDGSYIRFGENAGVLINSDGSPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_MYCLE (50S ribosomal protein L14 OS=Mycobacterium leprae GN=rplN PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12 Identity = 41/99 (41.41%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + I V G R A +GD+++ TVK P R V+ AV+VR K RR DG ++ F++NA VI+ P + +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSSRRY----ASIGDVIVGTVKDAIPGGNVKRGDVVKAVVVRTAKECRRPDGSYIKFDENAAVIIKPDNDPRGTRIFGPVGRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_FRASN (50S ribosomal protein L14 OS=Frankia sp. (strain EAN1pec) GN=rplN PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12 Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGA+ + I V G GR A +GD+++ TVK P R V+ AV+VR +K RR DG ++ F++NA V++ G+ +G+ I GP+G+E Sbjct: 11 ADNTGAREILCIRVLGGSGRRY----AGIGDIIVGTVKDALPGAGVKRGDVVKAVVVRTKKERRRPDGSYIRFDENAAVLIRDGGDPRGTRIFGPVGRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_ACIC1 (50S ribosomal protein L14 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=rplN PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12 Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGA+ + I V G GR A +GD+++ATVK P K V+ AV+VR K RR DG ++ F++NA V++ G+ +G+ I GP+G+E Sbjct: 11 ADNTGAREILCIRVLGGSGRRY----AGIGDVIIATVKDALPGAGVKKGDVVKAVVVRTAKERRRPDGSYIKFDENAAVLIKDGGDPRGTRIFGPVGRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_OLTVI (50S ribosomal protein L14, chloroplastic OS=Oltmannsiellopsis viridis GN=rpl14 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12 Identity = 40/102 (39.22%), Postives = 61/102 (59.80%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 VN ADN+GA+ L I V + SA +GD ++A VK+ P++ K ++ AVIVR K RR DG + F+DNA V++N +G +G+ + GP+ +E Sbjct: 8 VNVADNSGARKLMCIRVLDASFK----QSANIGDTIIAVVKEAIPNMPLKKSDIVRAVIVRSAKGIRRPDGTIIRFDDNAAVVINKEGNPRGTRVFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_GRATL (50S ribosomal protein L14, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rpl14 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12 Identity = 39/108 (36.11%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 + + + +N ADN+GA+ + I V G N A +GD+++ VK P++ + ++ AVIVR +K RR DG+ + F+DNA VI+N + +G+ + GPI KE Sbjct: 2 IQIQSYLNIADNSGARKIMCIQVLGS----NNPHYANIGDIIIGVVKDALPNMPIKKSDIIRAVIVRTKKTIRRNDGMSIRFDDNAAVIINQENNPRGTRVFGPIAKE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_MYCUA (50S ribosomal protein L14 OS=Mycobacterium ulcerans (strain Agy99) GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.365e-12 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + I V G R A +GD+++ATVK P R V+ AV+VR K RR DG ++ F++NA VI+ P + +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSSRRY----AGIGDIIVATVKDAIPGGNVKRGDVVKAVVVRTVKERRRPDGSYIKFDENAAVIIKPDNDPRGTRIFGPVGRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_MYCTU (50S ribosomal protein L14 OS=Mycobacterium tuberculosis GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.365e-12 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + I V G R A +GD+++ATVK P R V+ AV+VR K RR DG ++ F++NA VI+ P + +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSSRRY----AGIGDVIVATVKDAIPGGNVKRGDVVKAVVVRTVKERRRPDGSYIKFDENAAVIIKPDNDPRGTRIFGPVGRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_MYCTA (50S ribosomal protein L14 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.365e-12 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + I V G R A +GD+++ATVK P R V+ AV+VR K RR DG ++ F++NA VI+ P + +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSSRRY----AGIGDVIVATVKDAIPGGNVKRGDVVKAVVVRTVKERRRPDGSYIKFDENAAVIIKPDNDPRGTRIFGPVGRE 105 The following BLAST results are available for this feature:
BLAST of CX300441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 467
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300441 ID=CX300441; Name=CX300441; organism=Citrus clementina; type=EST; length=390bpback to top |