CX300441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_PICTO (50S ribosomal protein L14P OS=Picrophilus torridus GN=rpl14p PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.317e-28 Identity = 58/110 (52.73%), Postives = 80/110 (72.73%), Query Frame = 3 Query: 57 RMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 R + GLP+ A + C DNTGAK + +I VK + R+P+A VGDM +A+VKKG P++R KV+ AV+VRQR+P+RR DG + FEDNA V+V P GE++GS I GP+ +E Sbjct: 7 RETRGLPLGALIPCVDNTGAKMISLIDVKALHTVAKRIPAAGVGDMFIASVKKGTPEMRSKVVYAVVVRQRRPYRRADGTMIEFEDNAAVLVTPDGEVRGSEIKGPVARE 116
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_METTH (50S ribosomal protein L14P OS=Methanobacterium thermoautotrophicum GN=rpl14p PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.317e-28 Identity = 61/110 (55.45%), Postives = 83/110 (75.45%), Query Frame = 3 Query: 57 RMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +++ LPV A + C DNTGA+ + IISV+G KG RL +A VGDMV+ +VKKG D+R++V+ AVIVRQ+K +RR DG+ + FEDNA VIV+P+G +KGS I GP+ KE Sbjct: 7 KVTRALPVGARLQCVDNTGAREVEIISVRGYKGVRRRLAAAGVGDMVVVSVKKGTVDMRREVLNAVIVRQKKEYRRPDGLRVKFEDNAAVIVSPEGVLKGSEIRGPVAKE 116
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_METS3 (50S ribosomal protein L14P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl14p PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.952e-28 Identity = 58/109 (53.21%), Postives = 81/109 (74.31%), Query Frame = 3 Query: 60 MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +S LP+ AT+ C DNTGA+ + IISVKG KG RL A VGD+V+A+VKKG D+R++V+ AV++RQ+K + R DG+ + FEDNA VI+ P+G +KGS + GP+ KE Sbjct: 8 VSKALPIGATLQCVDNTGAREIQIISVKGFKGVRRRLDVAGVGDLVVASVKKGTADMRREVVNAVVIRQKKEYMRADGLRVKFEDNAAVIITPEGILKGSEVRGPVAKE 116
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_METVS (50S ribosomal protein L14P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl14p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.161e-28 Identity = 59/105 (56.19%), Postives = 77/105 (73.33%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 LP A + CADNTGAK L +I+VK G + RLPSA VG +V +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKE 116
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_METVA (50S ribosomal protein L14P OS=Methanococcus vannielii GN=rpl14p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.161e-28 Identity = 59/105 (56.19%), Postives = 77/105 (73.33%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 LP A + CADNTGAK L +I+VK G + RLPSA VG +V +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKE 116
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_METMP (50S ribosomal protein L14P OS=Methanococcus maripaludis GN=rpl14p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.804e-28 Identity = 59/105 (56.19%), Postives = 76/105 (72.38%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K +RR DG + FEDNA VIV P+G KGS I GP+ KE Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKE 116
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_PYRFU (50S ribosomal protein L14P OS=Pyrococcus furiosus GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.150e-27 Identity = 65/125 (52.00%), Postives = 87/125 (69.60%), Query Frame = 3 Query: 15 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 M+K+G G + G + R + LPV A + ADN+GAK + II V G RL SA VGDMV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I GP+ +E Sbjct: 1 MAKKGAGATRGVSAVRPTRALPVGAYLTVADNSGAKVIQIIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRGPVARE 125
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_METM7 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.150e-27 Identity = 59/105 (56.19%), Postives = 76/105 (72.38%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 LP A + CADNTGAK L II+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE Sbjct: 12 LPNGARLVCADNTGAKELEIIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKE 116
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_PYRKO (50S ribosomal protein L14P OS=Pyrococcus kodakaraensis GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.502e-27 Identity = 64/125 (51.20%), Postives = 87/125 (69.60%), Query Frame = 3 Query: 15 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 M+K+G G + G + R + LP+ A + ADN+GAK + II V G KG RL +A VGDMV+ATVKKG+PD+R +V+ AV+VRQRK +RR DG+ + FEDNA IV P+G +G+ I G I +E Sbjct: 1 MAKKGAGATRGISPVRPTRALPIGAYLKVADNSGAKVIQIIGVVGYKGTRRRLAAAGVGDMVVATVKKGRPDMRHQVVRAVVVRQRKEYRRLDGMRVKFEDNAAAIVTPEGVPRGTEIRGAIARE 125
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_METM6 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.502e-27 Identity = 58/105 (55.24%), Postives = 76/105 (72.38%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKE 116 The following BLAST results are available for this feature:
BLAST of CX300441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 467
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300441 ID=CX300441; Name=CX300441; organism=Citrus clementina; type=EST; length=390bpback to top |