CX300441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_DESRM (50S ribosomal protein L14 OS=Desulfotomaculum reducens (strain MI-1) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 + V + ADNTGA+ L I V G G L R S VGD+++A+VK+ P + V+ V+VR K RR DG ++ F++NA V++ +G+ I GP+ +E Sbjct: 2 IQVQTILKAADNTGARKLMCIRVMG--GSLRRYAS--VGDIIVASVKEATPGGVVKKGDVVKCVVVRTSKEVRRPDGSYIKFDENAAVVIKDDKTPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_DESOH (50S ribosomal protein L14 OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 38/99 (38.38%), Postives = 62/99 (62.63%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GAK +Y I V G +R A VGD+++ +VK+ P+ + K V+ AVIVR +K +R DG ++ F++N+ V+++ E G+ I GP+ +E Sbjct: 11 ADNSGAKIVYCIKVLG----GSRRRYATVGDVIVVSVKEAIPNSKVKKGDVLKAVIVRTKKEIKRPDGSYIRFDENSAVLISGNNEPLGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_DESMR (50S ribosomal protein L14 OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 39/108 (36.11%), Postives = 65/108 (60.19%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 + V + ++ ADN+GAK + I V G +R A VGD+++ +VK P+ + K VM AV+VR +K R DG ++ F+ N+ V+++ +GE G+ I GP+ +E Sbjct: 2 IQVESNLDVADNSGAKRVCCIKVLGG----SRRRYATVGDIIVVSVKDALPNSKVKKGAVMKAVVVRTKKEVGRADGSYIKFDSNSAVLLSNQGEPVGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CYTH3 (50S ribosomal protein L14 OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ++ ADN+GAK + +I V G G+ A +GD V+ TVK K V AV+VR +K +R DG ++ F DNA V++N E +G+ I GP+ +E Sbjct: 8 LSVADNSGAKEVLVIRVLGGTGKRY----ASIGDKVVVTVKSAISSSNMKKGTVSKAVVVRTKKEVKRADGSYIRFSDNAAVLLNNNDEPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CLOCE (50S ribosomal protein L14 OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 + V + + ADNTGAK L I V G R A +GD+V+A+VK P + V+ VIVR +K RR DG ++ F++NA VI+ +G+ I GP+ +E Sbjct: 2 IQVQSRMKVADNTGAKELMCIKVLGGSWR----KYANIGDVVVASVKNATPGGVVKKGDVVKCVIVRSKKGVRRPDGSYIRFDENAAVIIKDDKNPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CHLTR (50S ribosomal protein L14 OS=Chlamydia trachomatis GN=rplN PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + V G +R A VGD+++ +V+ +PD K V+ AVIVR R RKDG + F+ N+ VI++ KG KG+ I GPI +E Sbjct: 11 ADNTGAKKVKCFKVLGG----SRRRYATVGDVIVCSVRDVEPDSSVKKGDVVKAVIVRTRNDIHRKDGSTLRFDTNSCVIIDDKGNPKGTRIFGPIARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CHLTA (50S ribosomal protein L14 OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + V G +R A VGD+++ +V+ +PD K V+ AVIVR R RKDG + F+ N+ VI++ KG KG+ I GPI +E Sbjct: 11 ADNTGAKKVKCFKVLGG----SRRRYATVGDVIVCSVRDVEPDSSVKKGDVVKAVIVRTRNDIHRKDGSTLRFDTNSCVIIDDKGNPKGTRIFGPIARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CAUSK (50S ribosomal protein L14 OS=Caulobacter sp. (strain K31) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 + + + ADN+GA+ + I V G GR A VGD+++ +VK+ P R K V+ AV+VR + +RKDG + F+ NA VIVN + E G+ I GP+ +E Sbjct: 2 IQMQTNLEVADNSGARRVMCIKVLGGAGRRY----ASVGDVIVVSVKEAIPRGRVKKGDVLRAVVVRVNQGMKRKDGSLIRFDKNAAVIVNKQSEPVGTRIFGPVPRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_SPIOL (50S ribosomal protein L14, chloroplastic OS=Spinacia oleracea GN=rpl14 PE=1 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 37/102 (36.27%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADN+GA+ L I + G R A +GD+++A +K+ P+ R +V+ AV+VR K +R +G+ + ++DNA VI++ +G KG+ I G I +E Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----ARIGDVIVAVIKEAIPNTPLERSEVIRAVVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_ODOSI (50S ribosomal protein L14, chloroplastic OS=Odontella sinensis GN=rpl14 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 36/99 (36.36%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGA+ + I V G + A +GD ++ VK+ P++ R ++ A++VR K RR DG+++ F+DNA VIVN +G+ + GP+ +E Sbjct: 11 ADNTGARKIMCIRVLGGNRKY-----AKIGDTIIGVVKEAIPNMPIKRSDIVRAIVVRTSKTIRRPDGMYIRFDDNAAVIVNLDNNPRGTRVFGPVARE 104 The following BLAST results are available for this feature:
BLAST of CX300441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 467
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300441 ID=CX300441; Name=CX300441; organism=Citrus clementina; type=EST; length=390bpback to top |