CX300441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_EUCGG (50S ribosomal protein L14, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rpl14 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADN+GA+ L I + G R A +GD+++A +K+ P+ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ + G I +E Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDIIVAVIKEALPNTPLERSEVIRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_CICAR (50S ribosomal protein L14, chloroplastic OS=Cicer arietinum GN=rpl14 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 37/102 (36.27%), Postives = 61/102 (59.80%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADN+GA+ L I + G R A +GD+++A +KK P+ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I I +E Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AYIGDIIVAVIKKAVPNTPFERSEVIRAVIVRTCKELKRSNGIIIKYDDNAAVVIDKEGNPKGTRIFCAIARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_CHAGL (50S ribosomal protein L14, chloroplastic OS=Chaetosphaeridium globosum GN=rpl14 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 35/102 (34.31%), Postives = 61/102 (59.80%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADN+GA+ + I + G + +GD ++ VK+ P++ + +V+ AVIVR K +RK+G + F++NA VI+N +G +G+ I GP+ +E Sbjct: 8 LNVADNSGARKIMCIRILGGSNK----KYGHIGDTIIGVVKEAIPNMTLKKSEVVRAVIVRTCKELKRKNGTILRFDENAAVIINQEGNPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_CARPA (50S ribosomal protein L14, chloroplastic OS=Carica papaya GN=rpl14 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.390e-11 Identity = 37/102 (36.27%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADN+GA+ L I + G R A +GD+++A +K+ P+ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I G I +E Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNTPLERSEVIRAVIVRTCKELKRNNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIPRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RM14_RECAM (60S ribosomal protein L14, mitochondrial OS=Reclinomonas americana GN=RPL14 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 + V + ADN+GAK + I V G G R S VGD ++ VK+ P + K V A+IVR +KP RKDG + FE+NA V++N +G G+ I GP+ KE Sbjct: 2 IQVETMLKVADNSGAKRVQCIKVLG--GSKRRYGS--VGDTIVVAVKECMPRKKVKKGDVKKAIIVRTKKPIYRKDGSTISFENNAVVLINEQGIPIGTRILGPVTKE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_SYNSC (50S ribosomal protein L14 OS=Synechococcus sp. (strain CC9605) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 39/99 (39.39%), Postives = 57/99 (57.58%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GAK + I V G R A VGD+++A VK P++ K V+ AV+VR + RR+ G + F+DNA VI+N KG+ + GP+ +E Sbjct: 11 ADNSGAKRIQCIRVLGTNRRY-----AHVGDVIVAAVKDAAPNMGVKKSDVVKAVVVRTKATMRRETGNSIRFDDNAAVIINDDKNPKGTRVFGPVARE 104
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_SYNPX (50S ribosomal protein L14 OS=Synechococcus sp. (strain WH8102) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ++ ADN+GAK + I V G R A VGD+++A VK P++ K V+ AV+VR + RR G + F+DNA VI+N KG+ + GP+ +E Sbjct: 8 LSVADNSGAKRIQCIRVLGTNRRY-----AHVGDVIVAAVKDAMPNMGVKKSDVVKAVVVRTKATLRRDTGNSIRFDDNAAVIINADNNPKGTRVFGPVARE 104
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_STRSV (50S ribosomal protein L14 OS=Streptococcus sanguinis (strain SK36) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GA+ + I V G GR A +GD+++A+VK+ P K V+ AVIVR + RRKDG ++ F++NA VI+ +G+ I GP+ +E Sbjct: 11 ADNSGAREILTIKVLGGSGR----KFANIGDVIVASVKQATPGGAVKKGDVVKAVIVRTKSGARRKDGSYIKFDENAAVIIREDKTPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_STRGC (50S ribosomal protein L14 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GA+ + I V G GR A +GD+++A+VK+ P K V+ AVIVR + RRKDG ++ F++NA VI+ +G+ I GP+ +E Sbjct: 11 ADNSGAREILTIKVLGGSGR----KFANIGDVIVASVKQATPGGAVKKGDVVKAVIVRTKSGARRKDGSYIKFDENAAVIIREDKTPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_PROMT (50S ribosomal protein L14 OS=Prochlorococcus marinus (strain NATL2A) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 39/99 (39.39%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GAK L I V G R A VGD+++A+VK P++ K V+ AV+VR R RR+ G + F+DNA V++N +G+ + GP+ +E Sbjct: 11 ADNSGAKRLQCIRVLGSNRRY-----AHVGDVIVASVKDAMPNMGVKKSDVVKAVVVRTRATMRRETGNSIRFDDNAAVLINDDQNPRGTRVFGPVARE 104 The following BLAST results are available for this feature:
BLAST of CX300441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 467
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300441 ID=CX300441; Name=CX300441; organism=Citrus clementina; type=EST; length=390bpback to top |