CX300441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_PROM1 (50S ribosomal protein L14 OS=Prochlorococcus marinus (strain NATL1A) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 39/99 (39.39%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GAK L I V G R A VGD+++A+VK P++ K V+ AV+VR R RR+ G + F+DNA V++N +G+ + GP+ +E Sbjct: 11 ADNSGAKRLQCIRVLGSNRRY-----AHVGDVIVASVKDAMPNMGVKKSDVVKAVVVRTRATMRRETGNSIRFDDNAAVLINDDQNPRGTRVFGPVARE 104
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_PROAC (50S ribosomal protein L14 OS=Propionibacterium acnes GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK L I V G G R A +GD ++ TVK P +++K +V+ AV+VR K RR DG ++ F++NA V++ GE +G+ I GPI +E Sbjct: 11 ADNTGAKELLCIRVLG--GSKRRY--AYLGDTIVCTVKDAIPGGNVKKGEVVKAVVVRTVKSHRRPDGSYIKFDENAAVLLKGDGEPRGTRIFGPIARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_MYCA5 (50S ribosomal protein L14 OS=Mycoplasma arthritidis (strain 158L3-1) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 3 Query: 93 NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 N ADN+GAK + II K + G + R S +GD+V+ TVKK P +V+ AVIVR ++ R++G + F+DNA V++ G ++G+ + GP+ +E Sbjct: 9 NVADNSGAKEVMII--KNLGGSIVR--STNIGDVVVVTVKKAIPHGFVKEGQVLKAVIVRTKRGLMRENGSHIRFDDNAVVLIKEDGTLRGTRVFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_LACCB (50S ribosomal protein L14 OS=Lactobacillus casei (strain BL23) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GA+ + +I V G R + +GD+V+ATVK+ P + V+ AVIVR + RR DG ++ F++NA VI+N +G+ I GP+ +E Sbjct: 11 ADNSGAREILVIKVLGGSYR----KTGNIGDVVVATVKQATPGGVVKKADVVKAVIVRTKSGARRADGSYIKFDENAAVIINADKSPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_LACC3 (50S ribosomal protein L14 OS=Lactobacillus casei (strain ATCC 334) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GA+ + +I V G R + +GD+V+ATVK+ P + V+ AVIVR + RR DG ++ F++NA VI+N +G+ I GP+ +E Sbjct: 11 ADNSGAREILVIKVLGGSYR----KTGNIGDVVVATVKQATPGGVVKKADVVKAVIVRTKSGARRADGSYIKFDENAAVIINADKSPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_HELHP (50S ribosomal protein L14 OS=Helicobacter hepaticus GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 40/102 (39.22%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ++ ADN+GAK + I + G R A VGD+++A+VKK P+ + K V+ AV+VR +K R++G + F+DNA VI++ K E G+ I GP+ +E Sbjct: 8 LSVADNSGAKEIMCIKILGGSHRRY----ARVGDVIVASVKKAIPNGKVKKGQVVKAVVVRTKKEIHRENGSLVRFDDNAAVILDAKKEPIGTRIFGPVSRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_GEOTN (50S ribosomal protein L14 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 38/99 (38.38%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GA+ + +I V G GR A +GD+V+ATVK P + +V+ AV+VR ++ RR DG ++ F++NA VI+ +G+ I GP+ +E Sbjct: 11 ADNSGAREVLVIKVLGGSGRRY----ANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRSDGSYIRFDENACVIIRDDKSPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CORJK (50S ribosomal protein L14 OS=Corynebacterium jeikeium (strain K411) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 41/100 (41.00%), Postives = 62/100 (62.00%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPK-GEMKGSAITGPIGKE 386 ADNTGA+ + +I G G + R SA +GD+V+ATVK+ P K ++ AVIVR +K RR DG ++ F++NA VI+ + +G+ I GP+ +E Sbjct: 11 ADNTGAREILVIRPLG--GSVRR--SAGIGDVVVATVKEAAPGGTVKAGDIVKAVIVRAKKETRRPDGSYIAFDENAAVIIKANDNDPRGTRIFGPVARE 106
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CHLFF (50S ribosomal protein L14 OS=Chlamydophila felis (strain Fe/C-56) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + V G +R A VGD+++ +V+ +PD K V+ AVIVR R+ RKDG + F+ N+ VI++ KG KG+ I GPI +E Sbjct: 11 ADNTGAKKVKCFKVLGG----SRRRYATVGDIIVCSVRDVEPDSSIKKGDVVKAVIVRTRRDILRKDGSSLRFDTNSCVIIDEKGNPKGTRIFGPIARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CHLCV (50S ribosomal protein L14 OS=Chlamydophila caviae GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + V G +R A VGD+++ +V+ +PD K V+ AVIVR R+ RKDG + F+ N+ VI++ KG KG+ I GPI +E Sbjct: 11 ADNTGAKKVKCFKVLGG----SRRRYATVGDIIVCSVRDVEPDSSIKKGDVVKAVIVRTRRDILRKDGSSLRFDTNSCVIIDEKGNPKGTRIFGPIARE 105 The following BLAST results are available for this feature:
BLAST of CX300441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 467
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300441 ID=CX300441; Name=CX300441; organism=Citrus clementina; type=EST; length=390bpback to top |