CX300441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CHLAB (50S ribosomal protein L14 OS=Chlamydophila abortus GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + V G +R A VGD+++ +V+ +PD K V+ AVIVR R+ RKDG + F+ N+ VI++ KG KG+ I GPI +E Sbjct: 11 ADNTGAKRVKCFKVLGG----SRRRYATVGDVIVCSVRDVEPDSSVKKGDVVKAVIVRTRRNILRKDGSSLKFDTNSCVIIDEKGNPKGTRIFGPIARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CALS8 (50S ribosomal protein L14 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 39/99 (39.39%), Postives = 57/99 (57.58%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + I V G R A +GD+++ +VK P + V+ AVIVR RK RR+DG ++ F+DNA V++ +G+ I GP+ +E Sbjct: 11 ADNTGAKEVMCIRVLGGSNR----KFANIGDIIVCSVKDATPGGVVKKGDVVKAVIVRTRKGIRREDGTYIRFDDNAAVLIREDKTPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACWK (50S ribosomal protein L14 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GA+ L I V G GR A +GD+++ATVK+ P + V+ AV+VR + RR DG ++ F++NA VI+ +G+ I GP+ +E Sbjct: 11 ADNSGARELLTIKVLGGSGR----KYAYIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_VITVI (50S ribosomal protein L14, chloroplastic OS=Vitis vinifera GN=rpl14 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 38/102 (37.25%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA VI++ +G KG+ I G I +E Sbjct: 8 LNVADNSGARELMCIRIIGTSNRRY----AHIGDVIVAVIKEVVPNMPLERSEVIRAVIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIVRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_SOYBN (50S ribosomal protein L14, chloroplastic OS=Glycine max GN=rpl14 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 37/102 (36.27%), Postives = 61/102 (59.80%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADN+GA+ L I + G R A +GD+V+A +K+ P+ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I I +E Sbjct: 8 LNVADNSGARELMCIRILGASNRRY----AYIGDIVVAVIKQAVPNTNLERSEVIRAVIVRTCKELKRSNGIIIQYDDNAAVVIDQEGNPKGTRIFCAIARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_PHAVU (50S ribosomal protein L14, chloroplastic OS=Phaseolus vulgaris GN=rpl14 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 37/102 (36.27%), Postives = 61/102 (59.80%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADN+GA+ L I + G R A +GD+V+A +K+ P+ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I I +E Sbjct: 8 LNVADNSGARKLMCIRILGASNRRY----AYIGDIVVAVIKQAVPNTNLERSEVIRAVIVRTCKQLKRSNGIIIQYDDNAAVVIDQEGNPKGTRIFCAIARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_GUIAB (50S ribosomal protein L14, chloroplastic OS=Guizotia abyssinica GN=rpl14 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADN+GA+ L I + G R A +GD+++A +K P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ + G I +E Sbjct: 8 LNVADNSGARELMCIRIIGASHRRY----AHIGDVIVAVIKDAVPNMPLERSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_CERDE (50S ribosomal protein L14, chloroplastic OS=Ceratophyllum demersum GN=rpl14 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 35/102 (34.31%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADN+GA+ L I + G A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ + G I +E Sbjct: 8 LNVADNSGARELMCIRILGASNHRY----AHIGDVIVAVIKEAVPNMPLERSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_TREDE (50S ribosomal protein L14 OS=Treponema denticola GN=rplN PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11 Identity = 45/108 (41.67%), Postives = 62/108 (57.41%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP-DLRKK--VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 + V +N ADN+GAK + I V G G R A +GD+++ VK+ P + KK V AVIVR K +RR DG ++ F+DNA VIV+ KG I GP+ +E Sbjct: 2 IQVETRLNVADNSGAKLVECIKVIG--GSKRRY--AGIGDIIVVAVKEALPTSVIKKGTVEKAVIVRVSKEYRRPDGTYIRFDDNACVIVDDNKNPKGKRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_THETH (50S ribosomal protein L14 OS=Thermus thermophilus GN=rplN PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11 Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGA+ + I V +KG + A VGD+++A+VK+ P K V+ AV+VR +K +R DG + F+DNA VI+N + E +G+ + GP+ +E Sbjct: 11 ADNTGARKIMCIRV--LKG--SNAKYATVGDVIVASVKEAIPRGAVKEGDVVKAVVVRTKKEVKRPDGSAIRFDDNAAVIINNQLEPRGTRVFGPVARE 105 The following BLAST results are available for this feature:
BLAST of CX300441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 467
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300441 ID=CX300441; Name=CX300441; organism=Citrus clementina; type=EST; length=390bpback to top |