CX300441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_MOOTA (50S ribosomal protein L14 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplN PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11 Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 3 Query: 102 DNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 DNTGA+ L I V G G R S VGD+++A+VK+ P + V+ AV+VR +K +R DG ++ F +NA VI+N + +G+ I GP+ +E Sbjct: 12 DNTGARKLMCIRVLG--GSKRRYAS--VGDVIIASVKEATPGGVVKKGDVVRAVVVRTKKAVKRPDGSYIRFNENAAVIINEQNNPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_LACDB (50S ribosomal protein L14 OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=rplN PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11 Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GA+ L +I V G R + +GD+V+A VK+ P + V+ AVIVR + RR+DG ++ F++NA VI+N +G+ I GP+ +E Sbjct: 11 ADNSGARELLVIRVMGGSKR----KTGNIGDIVVAAVKQATPGGVVKKGDVVKAVIVRTKSGARREDGSYIKFDENAAVIINADKSPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_LACDA (50S ribosomal protein L14 OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=rplN PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11 Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GA+ L +I V G R + +GD+V+A VK+ P + V+ AVIVR + RR+DG ++ F++NA VI+N +G+ I GP+ +E Sbjct: 11 ADNSGARELLVIRVMGGSKR----KTGNIGDIVVAAVKQATPGGVVKKGDVVKAVIVRTKSGARREDGSYIKFDENAAVIINADKSPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_GEOMG (50S ribosomal protein L14 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rplN PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11 Identity = 38/102 (37.25%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ++ ADN+GA+ L+ I V G R A +GD+++A+V++ P+ + K V+ AVIVR K R DG ++ F+DN+ V++N + E G+ I GP+ +E Sbjct: 8 LDVADNSGARKLFCIKVLGGSKR----KYAGIGDIIVASVREAIPNSKVKKGDVVKAVIVRTAKEVGRLDGSYIRFDDNSAVVINNQREPVGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_GEOKA (50S ribosomal protein L14 OS=Geobacillus kaustophilus GN=rplN PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11 Identity = 38/99 (38.38%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GA+ + +I V G GR A +GD+V+ATVK P + +V+ AV+VR ++ RR DG ++ F++NA VI+ +G+ I GP+ +E Sbjct: 11 ADNSGAREVLVIKVLGGSGRRY----ANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFDENACVIIRDDKSPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CHLTB (50S ribosomal protein L14 OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=rplN PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11 Identity = 41/99 (41.41%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + V G +R A VGD+++ +V+ +PD K V+ AVIVR R RKDG + F+ N+ VI++ KG KG+ I GP+ +E Sbjct: 11 ADNTGAKKVKCFKVLGG----SRRRYATVGDVIVCSVRDIEPDSSVKKGDVVKAVIVRTRNDIHRKDGSTLRFDTNSCVIIDDKGNPKGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CHLT2 (50S ribosomal protein L14 OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=rplN PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11 Identity = 41/99 (41.41%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + V G +R A VGD+++ +V+ +PD K V+ AVIVR R RKDG + F+ N+ VI++ KG KG+ I GP+ +E Sbjct: 11 ADNTGAKKVKCFKVLGG----SRRRYATVGDVIVCSVRDIEPDSSVKKGDVVKAVIVRTRNDIHRKDGSTLRFDTNSCVIIDDKGNPKGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CAUCR (50S ribosomal protein L14 OS=Caulobacter crescentus GN=rplN PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11 Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 + + + ADN+GA+ + I V G GR A VGD+++ +VK+ P R K V+ AV+VR + +RKDG + F+ NA VIVN + E G+ I GP+ +E Sbjct: 2 IQMQTNLEVADNSGARRVMCIKVLGGAGRRY----ASVGDVIVVSVKEAIPRGRVKKGDVLRAVVVRVNQNLKRKDGSVIRFDKNAAVIVNKQSEPVGTRIFGPVPRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CAUCN (50S ribosomal protein L14 OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=rplN PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11 Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 + + + ADN+GA+ + I V G GR A VGD+++ +VK+ P R K V+ AV+VR + +RKDG + F+ NA VIVN + E G+ I GP+ +E Sbjct: 2 IQMQTNLEVADNSGARRVMCIKVLGGAGRRY----ASVGDVIVVSVKEAIPRGRVKKGDVLRAVVVRVNQNLKRKDGSVIRFDKNAAVIVNKQSEPVGTRIFGPVPRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CAMFF (50S ribosomal protein L14 OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=rplN PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11 Identity = 41/99 (41.41%), Postives = 62/99 (62.63%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GAK L I V G G R S +GD+++ +VKK P+ + K V+ AV+VR +K +R +G + F++NA VI++ K E G+ I GP+G+E Sbjct: 11 ADNSGAKELMCIKVLG--GSKRRYAS--LGDIIVCSVKKALPNGKIKKGQVVKAVVVRTKKEVQRANGSLIRFDENAAVILDNKKEPVGTRIFGPVGRE 105 The following BLAST results are available for this feature:
BLAST of CX300441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 467
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300441 ID=CX300441; Name=CX300441; organism=Citrus clementina; type=EST; length=390bpback to top |