CX300441

Overview
NameCX300441
Unique NameCX300441
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length390
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BDEBA (50S ribosomal protein L14 OS=Bdellovibrio bacteriovorus GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 37/102 (36.27%), Postives = 61/102 (59.80%), Query Frame = 3
Query:   90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            +N ADN+GAK +  + V G  G   R+ S  +GD+++ ++K+  P+ + K   V  AV+VR     RR DG ++ F+DN+ V++N   E  G+ I GP+ +E
Sbjct:    8 LNVADNSGAKEVMCVKVLG--GSKRRVAS--IGDVIVVSIKEALPNAKVKKGDVAKAVVVRTVAKLRRPDGSYIRFDDNSAVLINASKEPIGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACST (50S ribosomal protein L14 OS=Bacillus stearothermophilus GN=rplN PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 60/99 (60.61%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ + +I V G  GR      A +GD+V+ATVK   P     + +V+ AV+VR ++  RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGAREVLVIKVLGGSGRRY----ANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFDENACVIIRDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACHK (50S ribosomal protein L14 OS=Bacillus thuringiensis subsp. konkukian GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACCZ (50S ribosomal protein L14 OS=Bacillus cereus (strain ZK / E33L) GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACCR (50S ribosomal protein L14 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACCQ (50S ribosomal protein L14 OS=Bacillus cereus (strain Q1) GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACCN (50S ribosomal protein L14 OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIRFDENAAVIIKDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACC7 (50S ribosomal protein L14 OS=Bacillus cereus (strain AH187) GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACC4 (50S ribosomal protein L14 OS=Bacillus cereus (strain B4264) GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACC3 (50S ribosomal protein L14 OS=Bacillus cereus (strain 03BB102) GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105          
The following BLAST results are available for this feature:
BLAST of CX300441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 467
Match NameE-valueIdentityDescription
RL14_BDEBA7.488e-1136.2750S ribosomal protein L14 OS=Bdellovibrio bacterio... [more]
RL14_BACST7.488e-1138.3850S ribosomal protein L14 OS=Bacillus stearothermo... [more]
RL14_BACHK7.488e-1138.3850S ribosomal protein L14 OS=Bacillus thuringiensi... [more]
RL14_BACCZ7.488e-1138.3850S ribosomal protein L14 OS=Bacillus cereus (stra... [more]
RL14_BACCR7.488e-1138.3850S ribosomal protein L14 OS=Bacillus cereus (stra... [more]
RL14_BACCQ7.488e-1138.3850S ribosomal protein L14 OS=Bacillus cereus (stra... [more]
RL14_BACCN7.488e-1138.3850S ribosomal protein L14 OS=Bacillus cereus subsp... [more]
RL14_BACC77.488e-1138.3850S ribosomal protein L14 OS=Bacillus cereus (stra... [more]
RL14_BACC47.488e-1138.3850S ribosomal protein L14 OS=Bacillus cereus (stra... [more]
RL14_BACC37.488e-1138.3850S ribosomal protein L14 OS=Bacillus cereus (stra... [more]

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Properties
Property NameValue
Genbank descriptionC07010C07SK SaltLeaf1 Citrus clementina cDNA clone C07010C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300441 ID=CX300441; Name=CX300441; organism=Citrus clementina; type=EST; length=390bp
CTTTAGCTGCGAAAATGTCGAAGCGAGGACGTGGAGGATCAGCAGGTAAC
AAGTTCAGGATGTCACTGGGTTTGCCAGTGGCAGCAACTGTGAACTGTGC
TGACAACACTGGGGCAAAGAACCTTTACATCATCTCAGTTAAGGGAATCA
AAGGTCGCCTCAACCGTTTGCCGTCTGCCTGTGTTGGAGACATGGTTATG
GCTACCGTGAAGAAAGGGAAGCCTGATCTTAGGAAGAAGGTGATGCCCGC
CGTCATTGTAAGGCAGCGCAAGCCATGGCGCAGAAAGGATGGTGTCTTCA
TGTACTTTGAAGATAATGCTGGTGTTATTGTGAATCCAAAGGGAGAAATG
AAGGGTTCTGCCATCACCGGTCCAATTGGTAAAGAGTGTG
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