CX300441

Overview
NameCX300441
Unique NameCX300441
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length390
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACC2 (50S ribosomal protein L14 OS=Bacillus cereus (strain G9842) GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACC1 (50S ribosomal protein L14 OS=Bacillus cereus (strain ATCC 10987) GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACC0 (50S ribosomal protein L14 OS=Bacillus cereus (strain AH820) GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACAN (50S ribosomal protein L14 OS=Bacillus anthracis GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACAH (50S ribosomal protein L14 OS=Bacillus thuringiensis (strain Al Hakam) GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACAC (50S ribosomal protein L14 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_BACAA (50S ribosomal protein L14 OS=Bacillus anthracis (strain A0248) GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_ANOFW (50S ribosomal protein L14 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rplN PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 38/99 (38.38%), Postives = 60/99 (60.61%), Query Frame = 3
Query:   99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            ADN+GA+ + +I V G  GR      A +GD+V+ATVK   P     + +V+ AV+VR ++  RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGAREVLVIKVLGGSGRRY----ANIGDIVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRTDGSYIRFDENACVIIRDDKSPRGTRIFGPVARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_NYMAL (50S ribosomal protein L14, chloroplastic OS=Nymphaea alba GN=rpl14 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 35/102 (34.31%), Postives = 63/102 (61.76%), Query Frame = 3
Query:   90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            +N ADN+GA+ L  I + G     +    A +GD+++A +K+  P++   R +V+ AVIVR  K  +R +G+ + ++DNA V+++ +G  KG+ + G I +E
Sbjct:    8 LNVADNSGARKLMCIRIIGA----SNYRYAHIGDVIVAVIKEAVPNMPLERSEVIRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGSIARE 105          
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_LOTJA (50S ribosomal protein L14, chloroplastic OS=Lotus japonicus GN=rpl14 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11
Identity = 37/102 (36.27%), Postives = 61/102 (59.80%), Query Frame = 3
Query:   90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386
            +N ADN+GA+ L  I + G   R      A +GD+V+A +K+  P+    R +V+ AVIVR  K  +R +G+ + ++DNA V+++ +G  KG+ I   I +E
Sbjct:    8 LNVADNSGARKLMCIRIIGASNRRY----AYIGDIVVAVIKEAVPNTPLERSEVIRAVIVRTCKELKRSNGIIIQYDDNAAVVIDQEGNPKGTRIFCAIARE 105          
The following BLAST results are available for this feature:
BLAST of CX300441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 467
Match NameE-valueIdentityDescription
RL14_BACC27.488e-1138.3850S ribosomal protein L14 OS=Bacillus cereus (stra... [more]
RL14_BACC17.488e-1138.3850S ribosomal protein L14 OS=Bacillus cereus (stra... [more]
RL14_BACC07.488e-1138.3850S ribosomal protein L14 OS=Bacillus cereus (stra... [more]
RL14_BACAN7.488e-1138.3850S ribosomal protein L14 OS=Bacillus anthracis GN... [more]
RL14_BACAH7.488e-1138.3850S ribosomal protein L14 OS=Bacillus thuringiensi... [more]
RL14_BACAC7.488e-1138.3850S ribosomal protein L14 OS=Bacillus anthracis (s... [more]
RL14_BACAA7.488e-1138.3850S ribosomal protein L14 OS=Bacillus anthracis (s... [more]
RL14_ANOFW7.488e-1138.3850S ribosomal protein L14 OS=Anoxybacillus flavith... [more]
RK14_NYMAL7.488e-1134.3150S ribosomal protein L14, chloroplastic OS=Nympha... [more]
RK14_LOTJA7.488e-1136.2750S ribosomal protein L14, chloroplastic OS=Lotus ... [more]

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Properties
Property NameValue
Genbank descriptionC07010C07SK SaltLeaf1 Citrus clementina cDNA clone C07010C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300441 ID=CX300441; Name=CX300441; organism=Citrus clementina; type=EST; length=390bp
CTTTAGCTGCGAAAATGTCGAAGCGAGGACGTGGAGGATCAGCAGGTAAC
AAGTTCAGGATGTCACTGGGTTTGCCAGTGGCAGCAACTGTGAACTGTGC
TGACAACACTGGGGCAAAGAACCTTTACATCATCTCAGTTAAGGGAATCA
AAGGTCGCCTCAACCGTTTGCCGTCTGCCTGTGTTGGAGACATGGTTATG
GCTACCGTGAAGAAAGGGAAGCCTGATCTTAGGAAGAAGGTGATGCCCGC
CGTCATTGTAAGGCAGCGCAAGCCATGGCGCAGAAAGGATGGTGTCTTCA
TGTACTTTGAAGATAATGCTGGTGTTATTGTGAATCCAAAGGGAGAAATG
AAGGGTTCTGCCATCACCGGTCCAATTGGTAAAGAGTGTG
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