CX300441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_HALSA (50S ribosomal protein L14P OS=Halobacterium salinarium GN=rpl14p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.398e-25 Identity = 56/112 (50.00%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 51 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 K ++ GL + + CADNTGA+ L I SV G +GR NR P A +GD + +V KG P++R++V+ AV+VRQRKP RR DG + FEDNA VI++ GE +G+ I GPI +E Sbjct: 5 KADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISRE 116
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_HALS3 (50S ribosomal protein L14P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.398e-25 Identity = 56/112 (50.00%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 51 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 K ++ GL + + CADNTGA+ L I SV G +GR NR P A +GD + +V KG P++R++V+ AV+VRQRKP RR DG + FEDNA VI++ GE +G+ I GPI +E Sbjct: 5 KADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISRE 116
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_METBU (50S ribosomal protein L14P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl14p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.341e-25 Identity = 55/114 (48.25%), Postives = 79/114 (69.30%), Query Frame = 3 Query: 45 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 G + ++ L A + C DNTGA+ + IISVK +G NR+P +GDM + +VKKG P++RK+++ AVIVRQ+K +RR DG+ + FEDNA VIV+ KG KG+ I GP+ +E Sbjct: 3 GIRSKIPRALNAGAKIECVDNTGARTVEIISVKKYRGVKNRMPKGGIGDMCVVSVKKGTPEMRKQILYAVIVRQKKEFRRPDGIRVAFEDNAVVIVDDKGIPKGTDIKGPVARE 116
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_THEPD (50S ribosomal protein L14P OS=Thermofilum pendens (strain Hrk 5) GN=rpl14p PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.976e-25 Identity = 58/126 (46.03%), Postives = 86/126 (68.25%), Query Frame = 3 Query: 15 MSKRGRGGSAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 M+KRG + G +R+ L G+ + + V ADN+GA +I V K R+P A VGD+V+ +++ GKP+LRK+VM A+++RQR+P+RR DG ++ FEDNA VI+ P+GE KG+ I GP+ KE Sbjct: 1 MAKRGPK-TVGVSYRLGLTPGVFMESLVKVADNSGATLAKVIGVPHYKAVWRRIPGAAVGDIVIVSIRAGKPELRKQVMRAIVIRQRRPYRRPDGSWIAFEDNAVVIITPEGEPKGTEIRGPLAKE 125
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_SULSO (50S ribosomal protein L14P OS=Sulfolobus solfataricus GN=rpl14p PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.976e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 45 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 G++ ++ L + VN ADN+G K II V G +G L R+P A + DMVM ++KKG P++RK+ AVIVRQR P+RR DG ++ FEDNA VI+NP G KG+ + GPI +E Sbjct: 9 GSRKGLTPALQHYSVVNVADNSGGKEAMIIGVYGYRGVLRRVPFANIADMVMVSIKKGTPEVRKQKFRAVIVRQRMPYRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIARE 122
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_PYRCJ (50S ribosomal protein L14P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.554e-24 Identity = 60/128 (46.88%), Postives = 87/128 (67.97%), Query Frame = 3 Query: 15 MSKRGRGGSAG--NKFRMSLGLPVAATVNCADNTGAKNLYIISVKG--IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 M+KRG + G +F ++ G+ + + V ADN+GAK + +I V G K R+P A VGDMV+ V++GKP+LRK++ A++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+ E Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKSVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAME 128
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_PYRAE (50S ribosomal protein L14P OS=Pyrobaculum aerophilum GN=rpl14p PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.030e-24 Identity = 59/128 (46.09%), Postives = 87/128 (67.97%), Query Frame = 3 Query: 15 MSKRGRGGSAG--NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRL--NRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 M+KRG + G +F ++ G+ + + V ADN+GAK + +I V G + R+P A VGDMV+ V++GKP+LRK++ A++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+ E Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAME 128
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_SULAC (50S ribosomal protein L14P OS=Sulfolobus acidocaldarius GN=rpl14p PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.522e-24 Identity = 53/101 (52.48%), Postives = 72/101 (71.29%), Query Frame = 3 Query: 84 ATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ++V ADN+GAK II + G +G L R+P A + D+VM +V+KG PD+RK+ AVIVRQR P+RR DG ++ FEDNA VI+NP G KG+ + GPI +E Sbjct: 22 SSVVVADNSGAKEAVIIGIYGYRGVLRRVPFANIADLVMVSVRKGSPDVRKQKFKAVIVRQRMPFRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIARE 122
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_PYRIL (50S ribosomal protein L14P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl14p PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.522e-24 Identity = 58/128 (45.31%), Postives = 86/128 (67.19%), Query Frame = 3 Query: 15 MSKRGRGGSAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKGIKGRL--NRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 M+KRG + G +R + G+ + + V ADN+GA+ + +I V G + R+P A VGDMV+ V++GKP+LRK++ A++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+ E Sbjct: 1 MAKRGGKRTVGVSYRFHVTPGIFLNSLVPVADNSGARLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAME 128
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CALMQ (50S ribosomal protein L14P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl14p PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.522e-24 Identity = 57/128 (44.53%), Postives = 88/128 (68.75%), Query Frame = 3 Query: 15 MSKRGRGGSAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKG--IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 M+KRG + G +R L G+ + + VN ADN+GAK + +I V G K R+P VGDMV+ +V++GKP++RK+++ A++VRQR+P+RR DG ++ FEDNA VIV +G++KG+ + GP+ E Sbjct: 1 MAKRGGPRTVGVPWRFHLTPGIFMNSLVNVADNSGAKVVKVIGVVGHYSKNVHRRIPGVSVGDMVVVSVQEGKPEMRKQILRAIVVRQRRPFRRPDGTWVAFEDNAVVIVTEEGQVKGTEVHGPVAME 128 The following BLAST results are available for this feature:
BLAST of CX300441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 467
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300441 ID=CX300441; Name=CX300441; organism=Citrus clementina; type=EST; length=390bpback to top |