CX300441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_SACEN (50S ribosomal protein L14 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=rplN PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.249e-15 Identity = 45/99 (45.45%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GAK + I V G GR A +GD+++ATVK P K V+ AVIVRQ+K RR DG ++ F++NA V++ P GE +G+ I GP+G+E Sbjct: 11 ADNSGAKEILTIRVLGGSGRRY----AGIGDIIVATVKDAIPGANVKKGEVVKAVIVRQKKEKRRADGSYIRFDENAAVLIKPSGEPRGTRIFGPVGRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CLAMS (50S ribosomal protein L14 OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=rplN PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.458e-14 Identity = 46/99 (46.46%), Postives = 66/99 (66.67%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + I V G GR A +GD+++ATVK P +++K +V+ AVIVR +K RR DG ++ F++NA VI+N GE +G+ I GP+G+E Sbjct: 11 ADNTGAKEILTIRVLGGSGRRY----AGLGDVIVATVKDAIPGGNVKKGEVVKAVIVRTKKETRRPDGSYIKFDENAAVILNSNGEPRGTRIFGPVGRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CLAM3 (50S ribosomal protein L14 OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=rplN PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.458e-14 Identity = 46/99 (46.46%), Postives = 66/99 (66.67%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADNTGAK + I V G GR A +GD+++ATVK P +++K +V+ AVIVR +K RR DG ++ F++NA VI+N GE +G+ I GP+G+E Sbjct: 11 ADNTGAKEILTIRVLGGSGRRY----AGLGDVIVATVKDAIPGGNVKKGEVVKAVIVRTKKETRRPDGSYIKFDENAAVILNSNGEPRGTRIFGPVGRE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_STIHE (50S ribosomal protein L14, chloroplastic OS=Stigeoclonium helveticum GN=rpl14 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.487e-14 Identity = 43/103 (41.75%), Postives = 68/103 (66.02%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKG-IKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADNTGA+ + I V G I+G+ +A +GD+++A VK P+ K ++ AV+VR RK RR++G+F+ FEDNA V++N +G +G+ I GP+ +E Sbjct: 8 LNVADNTGARKVMCIRVLGGIQGQ-----TANIGDVIIAVVKDALPNTGVKKSDIVRAVVVRTRKGIRRENGMFIRFEDNAAVVINKEGNPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_DESVM (50S ribosomal protein L14 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rplN PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.540e-14 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 72 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 + V +T+ ADN+GAK + I V G G R A VGD+V+ +VK+ P + K VM AVIVR RK RR DG ++ F+ NA V++N +GE G+ I GP+ +E Sbjct: 2 IQVESTLQVADNSGAKKVACIKVLG--GSKRRY--ATVGDIVVVSVKEALPHCKVKKGDVMQAVIVRTRKEVRRVDGSYIKFDSNAAVLLNKQGEPVGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CYAP4 (50S ribosomal protein L14 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplN PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.540e-14 Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADN+GAK L I V G G R S VGD+++ATVK P++ K V+ AVIVR RK RR+ G+ + F+DNA V++N G KG+ + GP+ +E Sbjct: 8 LNVADNSGAKKLLCIRVLG--GGNRRYGS--VGDVIIATVKDATPNMPVKKSDVVRAVIVRTRKAIRRESGMSIRFDDNAAVLINQDGNPKGTRVFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_CHLT3 (50S ribosomal protein L14 OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=rplN PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.540e-14 Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 99 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 ADN+GAK + I V G GR A +GDM++ +VK P +K V AV+VR +K +RRKDG ++ F++NA V++N +GE +G+ I GP+ +E Sbjct: 11 ADNSGAKRVRCIHVLGGTGRRY----ATIGDMIVVSVKSAIPGGAVKKKDVSKAVVVRTKKEYRRKDGSYIRFDENAVVLLNTQGEPRGTRIFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RL14_THEEB (50S ribosomal protein L14 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplN PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.236e-14 Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADN+GAK L I V G G R S VGD+++ATVK P++ K V+ AVIVR RK RR+ G+ + F+DNA V++N G +G+ + GP+ +E Sbjct: 8 LNVADNSGAKKLLCIRVLG--GSNRRYGS--VGDVIIATVKDATPNMAVKKSDVVRAVIVRTRKSIRRESGMSIRFDDNAAVLINQDGNPRGTRVFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_ZYGCR (50S ribosomal protein L14, chloroplastic OS=Zygnema circumcarinatum GN=rpl14 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.236e-14 Identity = 40/102 (39.22%), Postives = 65/102 (63.73%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADN+GA+ L I V G R A +GDMV+A VK+ P++ + +++ AVIVR RK +R +G+ + F+DNA V++N +G +G+ + GP+ +E Sbjct: 8 LNVADNSGARKLMCIRVLGSSNR----KYAHIGDMVIAVVKETVPNMPLKKSEIVRAVIVRTRKGLKRDNGMVLRFDDNAAVVINQEGNPRGTRVFGPVARE 105
BLAST of CX300441 vs. ExPASy Swiss-Prot
Match: RK14_PHYPA (50S ribosomal protein L14, chloroplastic OS=Physcomitrella patens GN=rpl14 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.236e-14 Identity = 39/102 (38.24%), Postives = 64/102 (62.75%), Query Frame = 3 Query: 90 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 386 +N ADN+GA+ L I + G R A +GD+++A VK+ P++ + +V+ AV+VR K +RK+G + F+DNA VI+N +G KG+ + GP+ +E Sbjct: 8 LNVADNSGARKLMCIQILGASNR----KYAHIGDIIIAVVKEAIPNMPLKKSEVVRAVVVRTCKELKRKNGTIIQFDDNAAVIINQEGNPKGTRVFGPVARE 105 The following BLAST results are available for this feature:
BLAST of CX300441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 467
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300441 ID=CX300441; Name=CX300441; organism=Citrus clementina; type=EST; length=390bpback to top |