CX300444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 4.505e-39 Identity = 71/135 (52.59%), Postives = 90/135 (66.67%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 410 KYYGRGPIQ+++NYNY A+D +SFK+A WFWMT Q PKPSCH V+T +W P+ ND AGR+PGYG+ TNIINGG+ECG G + V +RIGF+ +C G+ G NLDCY+Q+PF Sbjct: 189 KYYGRGPIQISYNYNY--GPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDCYNQRPF 321
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.004e-38 Identity = 73/144 (50.69%), Postives = 97/144 (67.36%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPFCPILMARSM 437 KY+GRGPIQ++ NYNY C ATDPV+SFK+A+WFWMT Q PKPSCH+VI W PS+ D A RLPG+G+ TNIINGG+ECG+G ++ V++RIGF+ +C G+ PG NLDC +Q+ F L+ ++ Sbjct: 187 KYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLV--ATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNALLVDTL 328
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.814e-38 Identity = 74/135 (54.81%), Postives = 91/135 (67.41%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 410 KYYGRGPIQLT NYNY +T+P +SFK+AIWFWMT Q KPS H+VIT W PSA D +AGR+PGYG+ TNIINGGIECG G ++ V +R+GF+ +C FG+ PG NLDC +Q+ F Sbjct: 187 KYYGRGPIQLTHNYNY--GLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQRSF 319
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 156.377 bits (394), Expect = 4.981e-38 Identity = 73/134 (54.48%), Postives = 88/134 (65.67%), Query Frame = 3 Query: 9 YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 410 YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PKPS H VIT +W PS D AGR+PG+G+ TNI+NGGIECG G + V +RIGF+ +C G+ G NLDCY Q+PF Sbjct: 186 YYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 317
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 8.496e-38 Identity = 73/135 (54.07%), Postives = 89/135 (65.93%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 410 +YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PKPS H VIT +W PS D AGR PG+G+ TNIINGG+ECG G + V +RIGF+ +C G+ G NLDCY+Q+PF Sbjct: 133 RYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.449e-37 Identity = 71/135 (52.59%), Postives = 86/135 (63.70%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 410 +YYGRGPIQLT NY R ATDP++SF++AIWFWMTAQ KPSCH VI +W PS D A R+PGYG+ TNIINGG+EC G N AV +RIGF+ +CG + G NLDC +Q+ F Sbjct: 116 RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.893e-37 Identity = 73/135 (54.07%), Postives = 87/135 (64.44%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 410 +YYGRGPIQL+ NYNY ATD + FK+AIWFWMTAQPPKPS H VI +W PS D AGR+PG+G+ TNIINGGIECG G + V +RIGF+ +C G+ G NLDCY Q+PF Sbjct: 133 RYYGRGPIQLSHNYNY--GPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 265
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.472e-37 Identity = 72/135 (53.33%), Postives = 90/135 (66.67%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 410 KYYGRGPIQ+++NYNY + ATD V+SFK+A WFWMT Q PKPSCH VIT W PS D +AGRLPG+G+ TNIINGG+ECG+G V++RIGF+ +C + G NLDC +Q+PF Sbjct: 173 KYYGRGPIQISYNYNYGQAGKAIGVDLVNNPDLV--ATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQRPF 305
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.472e-37 Identity = 72/134 (53.73%), Postives = 88/134 (65.67%), Query Frame = 3 Query: 9 YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 410 YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PKPS H VIT +W PS D AGR+PG+G+ TNI+NGGIECG G + V +RIGF+ +C + G NLDCY+Q+PF Sbjct: 189 YYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDCYNQRPF 320
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 2.472e-37 Identity = 71/135 (52.59%), Postives = 88/135 (65.19%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 410 KYYGRGPIQL++N+NY A+D +SF +A WFWMT Q PKPSCH V T +W PSA+D AGR+PGYG+ TNIINGG+ECG G +D V +RIGF+ +C G+ NLDCY Q+PF Sbjct: 192 KYYGRGPIQLSYNFNY--GPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDCYSQRPF 324 The following BLAST results are available for this feature:
BLAST of CX300444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300444 ID=CX300444; Name=CX300444; organism=Citrus clementina; type=EST; length=448bpback to top |