CX300444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 6.966e-32 Identity = 60/134 (44.78%), Postives = 83/134 (61.94%), Query Frame = 3 Query: 9 YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 410 Y+GRGPIQ++WN+NY +D ++F++A+WFWMT + KPSCH+V+ E++P DV A R G+GL TNI+NGG+EC + + V NRIGF+ +C G+ G NLDC HQQPF Sbjct: 159 YHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSD--IAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDCEHQQPF 290
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 5.897e-31 Identity = 64/135 (47.41%), Postives = 79/135 (58.52%), Query Frame = 3 Query: 9 YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP-KPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 410 YYGRGP+QL WNYNY C ATDPVLSF++A+WFWM PSCHEVIT EW PS D+ AGR PG+G+ TNII G EC + +NRI ++ +C + PG NL C +Q+ F Sbjct: 172 YYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKV--ATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETF 304
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.716e-30 Identity = 62/134 (46.27%), Postives = 82/134 (61.19%), Query Frame = 3 Query: 9 YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 410 Y+GRGPIQ+++NYNY +D + FK+A+WFWMT Q PKPS H+VIT W PS+ D AGR+PGYG+ TNII+GG+ECG+G V +RIG++ NLDCY+Q+PF Sbjct: 79 YFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLV--TSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYKD-----------NLDCYNQKPF 199
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.578e-28 Identity = 61/143 (42.66%), Postives = 85/143 (59.44%), Query Frame = 3 Query: 9 YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP-KPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPFCPILMARS 434 Y+ RGP+Q+ +NYNY ATDP ++FK+A+W WMTA+ P +PS H V+T +W P+ D AGR PGYGLTTNI+ GG++C G A +R+ F+ +C G+ G NLDC+ Q PF +M+ S Sbjct: 199 YHARGPMQIAYNYNYGAAGEAIGADLLGNPELV--ATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIMSAS 337
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 4.673e-28 Identity = 61/143 (42.66%), Postives = 85/143 (59.44%), Query Frame = 3 Query: 9 YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP-KPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPFCPILMARS 434 Y+ RGP+Q+ +NYNY ATDP ++FK+A+W WMTA+ P +PS H V+T +W P+ D AGR PGYGLTTNI+ GG++C G A +R+ F+ +C G+ G NLDC+ Q PF +M+ S Sbjct: 199 YHARGPMQIAYNYNYGAAGEAIGADLLGNPELV--ATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGGIMSAS 337
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.725e-18 Identity = 49/129 (37.98%), Postives = 61/129 (47.29%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDC 392 KYYGRGP+QL+WNYNY ATD SFK+A+WFWMT + H V+ G+G TT ING +EC D +RI F+ +C FG+ PG NL C Sbjct: 183 KYYGRGPLQLSWNYNY--ALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT------NVHSVMNQ---------------GFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.666e-17 Identity = 46/129 (35.66%), Postives = 62/129 (48.06%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDC 392 KYYGRGP+Q++WNYNY A DP +SFK+A+WFWM N+V+ L G+G T ING +EC AV R+ ++ +C +FG+ PG NL C Sbjct: 183 KYYGRGPLQISWNYNY--GPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.842e-16 Identity = 44/129 (34.11%), Postives = 63/129 (48.84%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDC 392 KYYGRGP+Q++WN+NY A DP +SFK+A+WFWM + H+V++ G+G T ING +EC AV R+ ++ +C +FG+ PG NL C Sbjct: 180 KYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVMSQ---------------GFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.559e-15 Identity = 45/130 (34.62%), Postives = 66/130 (50.77%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDA-VRNRIGFFSTFCGKFGIQPGYNLDC 392 +Y+GRGP+QL+WNYNY+ DP++SFK+++WFW+ + VI D + G+G T IINGG EC G N A + R+G++ +C + G+ PG NL C Sbjct: 141 EYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIV--GRDPIISFKTSLWFWI-----RKGVQYVILDPNQ------------GFGATIRIINGGQEC-DGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 5.925e-15 Identity = 43/128 (33.59%), Postives = 63/128 (49.22%), Query Frame = 3 Query: 9 YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDC 392 Y+GRGPIQL+WNYNY C +++P ++F++ +WFWM + +P N G+G T ING +EC G + AV RI ++ +CG+ G+ PG NL C Sbjct: 165 YFGRGPIQLSWNYNYGACGQSLNLNLLGQPELV--SSNPTVAFRTGLWFWMNSV--------------RPVLNQ-------GFGATIRAING-MECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268 The following BLAST results are available for this feature:
BLAST of CX300444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300444 ID=CX300444; Name=CX300444; organism=Citrus clementina; type=EST; length=448bpback to top |