CX300444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 7.738e-15 Identity = 46/130 (35.38%), Postives = 63/130 (48.46%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRN-RIGFFSTFCGKFGIQPGYNLDC 392 KYYGRGP+Q++WNYNY A D V++FK+A+WFWM S H V+ G+G TT + +ECG G N A N R+G++ +C + G+ PG NL C Sbjct: 164 KYYGRGPLQISWNYNY--GPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECG-GNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.320e-14 Identity = 41/128 (32.03%), Postives = 59/128 (46.09%), Query Frame = 3 Query: 9 YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDC 392 YYGRGP+Q++WN+NY A PVL+F++A+W+W + H+ G+G T ING +EC AV NR+ ++ FC +FG+ PG NL C Sbjct: 165 YYGRGPLQISWNFNY--GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTN------NVHDAFVSG-------------QGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.724e-14 Identity = 45/130 (34.62%), Postives = 62/130 (47.69%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRN-RIGFFSTFCGKFGIQPGYNLDC 392 KYYGRGP+Q++WNYNY A D V++FK+A+WFWM N+V+ G+G T ING +EC G N A N R+G++ +C + + PG NL C Sbjct: 175 KYYGRGPLQISWNYNY--GPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALEC-NGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 5.016e-14 Identity = 48/129 (37.21%), Postives = 68/129 (52.71%), Query Frame = 3 Query: 6 KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWND-AVR-NRIGFFSTFCGKFGIQPGYNL 386 KY RGPIQLT N+NY DP++SFK+A+WFWM+ KPSCH+++ +AN A R+P G+ NII+ G +D AVR + IGF+ +C G+ G++L Sbjct: 235 KYSPRGPIQLTHNFNY--GLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISRAF----GHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.235e-12 Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 3 Query: 159 MTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 296 MT Q KPSCH+VIT+ W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46
BLAST of CX300444 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.594e-12 Identity = 39/128 (30.47%), Postives = 60/128 (46.88%), Query Frame = 3 Query: 9 YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDC 392 Y+GRGPIQL+WN+NY + D V+SFK+A+W+WM Q +P ++ G+G T ING +EC V+ R+ +++ +C + G+ G NL C Sbjct: 166 YHGRGPIQLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270 The following BLAST results are available for this feature:
BLAST of CX300444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300444 ID=CX300444; Name=CX300444; organism=Citrus clementina; type=EST; length=448bpback to top |