CX300452

Overview
NameCX300452
Unique NameCX300452
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length413
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10325 contig Ccv1_Contig10325:715..1127. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300452 vs. ExPASy Swiss-Prot
Match: ADT4_HUMAN (ADP/ATP translocase 4 OS=Homo sapiens GN=SLC25A31 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.824e-31
Identity = 76/137 (55.47%), Postives = 92/137 (67.15%), Query Frame = 2
Query:    2 GAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVK-YKSSLD 409
            GAAGA+SL  VY LD+ARTRL  D    K   ERQF GL D   K  KSDGIAGLY+GF +S  GIIVYR  YFG YD++K ++   K +  F  SF +  ++T  +G+ SYP DTVRRRMMM SGEA + YK +LD
Sbjct:  133 GAAGATSLCVVYPLDFARTRLGVDI--GKGPEERQFKGLGDCIMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPK-KTPFLVSFFIAQVVTTCSGILSYPFDTVRRRMMMQSGEAKRQYKGTLD 266          
BLAST of CX300452 vs. ExPASy Swiss-Prot
Match: ADT2_RAT (ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 4.994e-31
Identity = 75/139 (53.96%), Postives = 90/139 (64.75%), Query Frame = 2
Query:    2 GAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEA---VKYKSSLD 409
            GAAGA+SL FVY LD+ARTRLA D    K G ER+F GL D   K  KSDGI GLY+GFN+S  GII+YR  YFG+YD+ K ++   K     F S+ +   +T  AGL SYP DTVRRRMMM SG     + Y  +LD
Sbjct:  121 GAAGATSLCFVYPLDFARTRLAADV--GKAGAEREFKGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPK-NTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLD 256          
BLAST of CX300452 vs. ExPASy Swiss-Prot
Match: ADT2_MOUSE (ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 4.994e-31
Identity = 75/139 (53.96%), Postives = 90/139 (64.75%), Query Frame = 2
Query:    2 GAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEA---VKYKSSLD 409
            GAAGA+SL FVY LD+ARTRLA D    K G ER+F GL D   K  KSDGI GLY+GFN+S  GII+YR  YFG+YD+ K ++   K     F S+ +   +T  AGL SYP DTVRRRMMM SG     + Y  +LD
Sbjct:  121 GAAGATSLCFVYPLDFARTRLAADV--GKAGAEREFKGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPK-NTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLD 256          
BLAST of CX300452 vs. ExPASy Swiss-Prot
Match: ADT2_BOVIN (ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 4.994e-31
Identity = 75/139 (53.96%), Postives = 90/139 (64.75%), Query Frame = 2
Query:    2 GAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEA---VKYKSSLD 409
            GAAGA+SL FVY LD+ARTRLA D    K G ER+F GL D   K  KSDGI GLY+GFN+S  GII+YR  YFG+YD+ K ++   K     F S+ +   +T  AGL SYP DTVRRRMMM SG     + Y  +LD
Sbjct:  121 GAAGATSLCFVYPLDFARTRLAADV--GKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPK-NTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLD 256          
BLAST of CX300452 vs. ExPASy Swiss-Prot
Match: ADT_DROME (ADP,ATP carrier protein OS=Drosophila melanogaster GN=sesB PE=2 SV=4)

HSP 1 Score: 132.494 bits (332), Expect = 6.523e-31
Identity = 73/138 (52.90%), Postives = 92/138 (66.67%), Query Frame = 2
Query:    2 GAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGE---AVKYKSSL 406
            GAAGA+SL FVY LD+ARTRLA D     KGG+R+F GL +   K  KSDGI GLYRGF +S  GII+YR  YFG YD+ + ++   K     + S+A+  ++T  AG+ SYP DTVRRRMMM SG     V YK++L
Sbjct:  136 GAAGATSLCFVYPLDFARTRLAADTG---KGGQREFTGLGNCLTKIFKSDGIVGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPK-NTPIYISWAIAQVVTTVAGIVSYPFDTVRRRMMMQSGRKATEVIYKNTL 269          
BLAST of CX300452 vs. ExPASy Swiss-Prot
Match: ADT4_BOVIN (ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.523e-31
Identity = 75/137 (54.74%), Postives = 91/137 (66.42%), Query Frame = 2
Query:    2 GAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVK-YKSSLD 409
            GAAGA+SL  VY LD+ARTRL  D    K   ERQF GL D   K  KSDGI GLY+GF +S  GIIVYR  YFG YD++K ++   K +  F  SF +  ++T  +G+ SYP DTVRRRMMM SGEA + YK +LD
Sbjct:  137 GAAGATSLCVVYPLDFARTRLGADI--GKGPEERQFKGLGDCIMKIAKSDGIVGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPK-ETHFLVSFFIAQVVTTCSGILSYPFDTVRRRMMMQSGEAERQYKGTLD 270          
BLAST of CX300452 vs. ExPASy Swiss-Prot
Match: ADT3_BOVIN (ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 6.523e-31
Identity = 76/143 (53.15%), Postives = 90/143 (62.94%), Query Frame = 2
Query:    2 GAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLI----TNGAGLASYPIDTVRRRMMMTSGEA---VKYKSSLD 409
            GAAGA+SL FVY LD+ARTRLA D    K G ER+F GL D   K  KSDGI GLY+GFN+S  GII+YR  YFG+YD+ K     G L D       + W+I    T  AG+ SYP DTVRRRMMM SG     + YK ++D
Sbjct:  121 GAAGATSLCFVYPLDFARTRLAADV--GKSGSEREFRGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAK-----GMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMMQSGRKGADIMYKGTVD 256          
BLAST of CX300452 vs. ExPASy Swiss-Prot
Match: ADT2_PONAB (ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 6.523e-31
Identity = 77/143 (53.85%), Postives = 89/143 (62.24%), Query Frame = 2
Query:    2 GAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLI----TNGAGLASYPIDTVRRRMMMTSGEA---VKYKSSLD 409
            GAAGA+SL FVY LD+ARTRLA D    K G ER+F GL D   K  KSDGI GLY+GFN+S  GII+YR  YFG+YD+ K     G L D       + W+I    T  AGL SYP DTVRRRMMM SG     + Y  +LD
Sbjct:  121 GAAGATSLCFVYPLDFARTRLAADV--GKAGAEREFRGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAK-----GMLPDPKNTHIVISWMIAQTVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLD 256          
BLAST of CX300452 vs. ExPASy Swiss-Prot
Match: ADT2_HUMAN (ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 PE=1 SV=6)

HSP 1 Score: 132.494 bits (332), Expect = 6.523e-31
Identity = 77/143 (53.85%), Postives = 89/143 (62.24%), Query Frame = 2
Query:    2 GAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLI----TNGAGLASYPIDTVRRRMMMTSGEA---VKYKSSLD 409
            GAAGA+SL FVY LD+ARTRLA D    K G ER+F GL D   K  KSDGI GLY+GFN+S  GII+YR  YFG+YD+ K     G L D       + W+I    T  AGL SYP DTVRRRMMM SG     + Y  +LD
Sbjct:  121 GAAGATSLCFVYPLDFARTRLAADV--GKAGAEREFRGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAK-----GMLPDPKNTHIVISWMIAQTVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLD 256          
BLAST of CX300452 vs. ExPASy Swiss-Prot
Match: ADT2_TACAC (ADP/ATP translocase 2 OS=Tachyglossus aculeatus aculeatus GN=SLC25A5 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.522e-30
Identity = 73/139 (52.52%), Postives = 89/139 (64.03%), Query Frame = 2
Query:    2 GAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEA---VKYKSSLD 409
            GAAGA+SL FVY LD+ARTRLA D    K G  R+F GL D   K  KSDGI GLY+GFN+S  GII+YR  YFG+YD+ K ++   K     F S+ +   +T  AGL SYP DTVRRRMMM SG     + Y  ++D
Sbjct:  121 GAAGATSLCFVYPLDFARTRLAADV--GKAGDAREFKGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPK-NTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGSDIMYTGTID 256          
The following BLAST results are available for this feature:
BLAST of CX300452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
ADT4_HUMAN3.824e-3155.47ADP/ATP translocase 4 OS=Homo sapiens GN=SLC25A31 ... [more]
ADT2_RAT4.994e-3153.96ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc2... [more]
ADT2_MOUSE4.994e-3153.96ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 P... [more]
ADT2_BOVIN4.994e-3153.96ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=... [more]
ADT_DROME6.523e-3152.90ADP,ATP carrier protein OS=Drosophila melanogaster... [more]
ADT4_BOVIN6.523e-3154.74ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE... [more]
ADT3_BOVIN6.523e-3153.15ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=... [more]
ADT2_PONAB6.523e-3153.85ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 P... [more]
ADT2_HUMAN6.523e-3153.85ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 P... [more]
ADT2_TACAC5.522e-3052.52ADP/ATP translocase 2 OS=Tachyglossus aculeatus ac... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC07010D07SK SaltLeaf1 Citrus clementina cDNA clone C07010D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300452 ID=CX300452; Name=CX300452; organism=Citrus clementina; type=EST; length=413bp
AGGTGCTGCTGGTGCTTCATCCCTTCTCTTTGTTTACTCCTTGGACTATG
CTCGTACCCGTCTGGCCAATGATGCCAAAGCTGCGAAGAAGGGAGGAGAG
AGGCAATTCAATGGGCTGGTTGATGTCTACAGAAAGACATTGAAATCTGA
TGGCATTGCTGGGCTTTACCGTGGTTTCAACATTTCATGTGTTGGAATCA
TTGTGTACCGTGGTCTTTACTTCGGCATGTATGATTCTCTGAAGCCAGTG
GTCTTGACTGGAAAGTTGCAGGATAGTTTCTTTGCTAGCTTCGCCCTTGG
GTGGCTCATCACTAATGGTGCTGGTCTTGCTTCCTACCCAATTGACACTG
TCCGTAGAAGGATGATGATGACATCTGGTGAGGCTGTCAAGTACAAGAGC
TCTCTTGATGCAT
back to top