CX300457

Overview
NameCX300457
Unique NameCX300457
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length453
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:1543..1995. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: ALH13_CAEEL (Probable delta-1-pyrroline-5-carboxylate synthetase OS=Caenorhabditis elegans GN=alh-13 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 5.970e-34
Identity = 73/152 (48.03%), Postives = 96/152 (63.16%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            +S  IPVLGHA+G+ HVY+DK  +   A  IV D+K DYP+ACNA ET+L+HKDLA     + L    + EGV L  GP+ + LLK   P       EY S+ CT+E+VD+V  A+ HI ++GS HT+ I+ E+   AE FL  VDSA  FH
Sbjct:  564 KSKGIPVLGHAEGVWHVYIDKDCDEQKAIQIVRDSKCDYPSACNAAETILIHKDLATAPFFDSLCSMFKAEGVKLHAGPKLAALLKFAPPPAESMSFEYGSLECTLEVVDNVEEAVAHIIRYGSGHTESIITENTNTAEHFLKHVDSACAFH 715          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: P5CS_PONAB (Delta-1-pyrroline-5-carboxylate synthetase OS=Pongo abelii GN=ALDH18A1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.330e-33
Identity = 68/147 (46.26%), Postives = 99/147 (67.35%), Query Frame = 3
Query:   15 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVF 449
            IPV+GH++GICH+YVD  A++D    +V D+K +YPAACNA+ETLL+H+DL      ++++  L+ E V +  GP+ +  L     E +    EY  +   +E+VD+V+ AIDHIH++GS+HTD IV E++  AE FL  VDSA VF
Sbjct:  574 IPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEYPAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTENENTAEFFLQHVDSACVF 720          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: P5CS_MOUSE (Delta-1-pyrroline-5-carboxylate synthetase OS=Mus musculus GN=Aldh18a1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.737e-33
Identity = 68/147 (46.26%), Postives = 98/147 (66.67%), Query Frame = 3
Query:   15 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVF 449
            IPV+GH++ ICH+YVD  A++D    +V D+K +YPAACNA+ETLL+H+DL      ++++  L+ E V +  GP+ +  L     E +    EY  +   +E+VD V+ AIDHIH++GS+HTD IV E++K AE FL  VDSA VF
Sbjct:  574 IPVMGHSESICHMYVDSEASVDKVTRLVRDSKCEYPAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDLEVCIEVVDSVQEAIDHIHKYGSSHTDVIVTENEKTAEFFLQHVDSACVF 720          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_SYNY3 (Probable gamma-glutamyl phosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=proA PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.870e-33
Identity = 76/152 (50.00%), Postives = 102/152 (67.11%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI-PETRL-FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            ++T+IPVLGHADGICH+Y+D  A+L  A  I +DAK  YPAACNA+ETLLVH+ +A    L  L   L  +GV L G     KL+   P T   +  EY+ ++ +++IVD + AAIDHI+Q+GS HTD I++ED   AE F  +VDSA V+H
Sbjct:  217 QNTQIPVLGHADGICHLYLDAQADLSKAIPITVDAKTQYPAACNAIETLLVHQAIAAE-FLPPLAQALGEKGVSLRGDSGTQKLIDCEPATEADWCTEYSDLILSIKIVDSLEAAIDHINQYGSKHTDGIISEDLTAAEQFCQRVDSAGVYH 367          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_THEEB (Gamma-glutamyl phosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=proA PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.921e-32
Identity = 72/151 (47.68%), Postives = 100/151 (66.23%), Query Frame = 3
Query:    6 STKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL--LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            +T+IPVLGHADG+CH+YVD++A+L+ A  I +DAK  YPAACNA+ETLLVH+D+A    L ++   LQ  GV L G   A  L  + +     +  EY  ++  +++V D+ AA+DHI  +GS HT+ IV ED   A  FL +VD+A VFH
Sbjct:  222 NTRIPVLGHADGLCHLYVDRAADLEKAIAITLDAKTQYPAACNAIETLLVHRDIA-EAFLPKVAAALQQAGVELRGDAIACDLVPMSLASEADWATEYCDLILAIKVVPDLDAALDHIATYGSGHTEAIVTEDAAAAARFLQEVDAAGVFH 371          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_SYNJA (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain JA-3-3Ab) GN=proA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.508e-32
Identity = 72/153 (47.06%), Postives = 105/153 (68.63%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK--IPETR-LFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            E+T+IPVLGHADG+CH+YVD++A++D+A  + +D+K  YPAACNA+ETLLVH ++A    L   V  L+ +GV L G PR  +L+   IP T   +  EY  ++ ++++V  +  AI HI ++GS HT+ IV ED   A+ FL +VD+A VFH
Sbjct:  231 ENTRIPVLGHADGLCHLYVDRAADVDMAVRLTLDSKTQYPAACNAIETLLVHAEIAPR-FLPLAVQALREKGVELRGDPRCRQLVPDLIPATEDDWSTEYADLILSIKVVGSLDEAIAHIERYGSRHTEAIVTEDAAAAQRFLDEVDAAGVFH 382          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_ANAVT (Gamma-glutamyl phosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=proA PE=3 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 2.508e-32
Identity = 74/155 (47.74%), Postives = 100/155 (64.52%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL-----FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            E+T+IPVLGHADGICHVY+DKSA+++ A  + +DAK+ YPAACNA+ETLLVH  +A    L ++   L    V L G  R  ++L  PE        +  EY+  + +++IVD +  AI HI+Q+GS HTD I+ ED    ETF   V+SA VFH
Sbjct:  217 ENTRIPVLGHADGICHVYIDKSADIEKAIAVSVDAKVQYPAACNAIETLLVHHSIAAE-FLPKVAQALAERQVELKGDERTLQIL--PEIAAATAIDWETEYSDFILSIKIVDSLTEAIAHINQYGSRHTDAIITEDVAAVETFFGLVNSAGVFH 368          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_PROMT (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=proA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.276e-32
Identity = 74/153 (48.37%), Postives = 104/153 (67.97%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            E+T+IPVLGHADGICH+YVD S ++D A +I +D+KI YPAACNA+ETLL+H+D+A    L + +     EGV L G  ++  L    K  E+  +  EY  ++ +++IV +V  AI+HI ++ S HT+ IV ED+ VAE FL  VDSA V+H
Sbjct:  221 ENTRIPVLGHADGICHLYVDNSVDIDKAISIALDSKIQYPAACNAIETLLIHEDIA-EMFLKKGLPIFSSEGVTLKGDTKSQALGVKNKADESD-WSKEYLDLILSIKIVRNVNEAIEHIRKYSSRHTEAIVTEDKMVAEKFLSSVDSAGVYH 371          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_SYNJB (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. GN=proA PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.278e-32
Identity = 73/153 (47.71%), Postives = 104/153 (67.97%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK--IPETR-LFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            E+T+IPVLGHADG+CH+YVD++A++D+A  + +D+K  YPAACNA+ETLLVHK +A +  L   V  L+ +GV L G P   +L+   IP T   +  EY  ++ ++++V  +  AI HI Q+GS HT+ IV ED   A  FL +VD+A VFH
Sbjct:  231 ENTRIPVLGHADGLCHLYVDRAADVDMAIKLTVDSKTQYPAACNAIETLLVHKAIAPH-FLPLAVKALREKGVELRGDPLCRELVPDLIPATEDDWSTEYADLILSIKVVGSLDEAIAHIQQYGSRHTEAIVTEDAAAARRFLDEVDAAGVFH 382          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_PROM1 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain NATL1A) GN=proA PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.278e-32
Identity = 74/153 (48.37%), Postives = 104/153 (67.97%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            E+T+IPVLGHADGICH+YVD S ++D A +I +D+KI YPAACNA+ETLL+H+D+A    L + +     EGV L G  ++  L    K  E+  +  EY  ++ +++IV +V  AI+HI ++ S HT+ IV ED+ VAE FL  VDSA V+H
Sbjct:  221 ENTRIPVLGHADGICHLYVDNSVDIDKAISIALDSKIQYPAACNAIETLLIHEDVA-EMFLKKGLPIFSSEGVTLKGDTKSQALGVKNKADESD-WSKEYLDLILSIKIVRNVNEAIEHIRKYSSRHTEAIVTEDKMVAEKFLSSVDSAGVYH 371          
The following BLAST results are available for this feature:
BLAST of CX300457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALH13_CAEEL5.970e-3448.03Probable delta-1-pyrroline-5-carboxylate synthetas... [more]
P5CS_PONAB1.330e-3346.26Delta-1-pyrroline-5-carboxylate synthetase OS=Pong... [more]
P5CS_MOUSE1.737e-3346.26Delta-1-pyrroline-5-carboxylate synthetase OS=Mus ... [more]
PROA_SYNY33.870e-3350.00Probable gamma-glutamyl phosphate reductase OS=Syn... [more]
PROA_THEEB1.921e-3247.68Gamma-glutamyl phosphate reductase OS=Thermosynech... [more]
PROA_SYNJA2.508e-3247.06Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_ANAVT2.508e-3247.74Gamma-glutamyl phosphate reductase OS=Anabaena var... [more]
PROA_PROMT3.276e-3248.37Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_SYNJB4.278e-3247.71Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_PROM14.278e-3248.37Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]

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Properties
Property NameValue
Genbank descriptionC07010D12SK SaltLeaf1 Citrus clementina cDNA clone C07010D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300457 ID=CX300457; Name=CX300457; organism=Citrus clementina; type=EST; length=453bp
AGGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAATTTGTCAT
GTTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAACATTGTTAT
TGATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGAAACTCTTC
TGGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGCTTGTTGTA
GAACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGAGCAAGTAA
ATTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTACAACTCAA
TGGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTATTGACCAT
ATTCATCAACATGGAAGTGCCCATACTGATTGCATTGTTGCAGAAGATCA
AAAAGTTGCTGAAACATTTTTATGTCAAGTTGACAGTGCTGCAGTATTTC
ATA
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