CX300457

Overview
NameCX300457
Unique NameCX300457
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length453
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:1543..1995. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_GEOMG (Gamma-glutamyl phosphate reductase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=proA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.741e-25
Identity = 61/154 (39.61%), Postives = 93/154 (60.39%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLA------CNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            E +KIPV+ H  G+CHV+VD SA+ D+A+ IV++AK+  P  CNA+ETLL+HKD+A          L +L VEL+ +       P+A K  +      +  EY  ++  V +VD +  AIDHI+ +GS HT+ IV  D   ++ F+ +V+S+ V
Sbjct:  216 EHSKIPVIKHYKGVCHVFVDASADFDMAERIVVNAKVQRPGVCNALETLLIHKDVAEAFIPRIAATLTDLKVELRGDDCVRQFAPQAKKATE----EDWQAEYLELILAVRVVDGLNEAIDHINAYGSLHTEAIVTRDYHNSQRFIREVNSSTV 365          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_RHOPS (Gamma-glutamyl phosphate reductase OS=Rhodopseudomonas palustris (strain BisB5) GN=proA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.274e-25
Identity = 68/150 (45.33%), Postives = 90/150 (60.00%), Query Frame = 3
Query:   12 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGP---RASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            ++PV  H +GI HVYVD++A+LD+AK+IV++AK+     C A ETLL+ +  A +  L  LV  L   G  + G     RA   +K    + +  EY   V   ++VDDV  AI HIH+HGS HTD IVAED K A  FL +VDSA V H
Sbjct:  231 RVPVFAHLEGINHVYVDRTADLDMAKSIVLNAKMRRTGVCGAAETLLIDR-AAADTHLAPLVGMLIDAGCEVRGDDAVQRADARVKPATDQDWDTEYLDAVIAAKVVDDVDDAITHIHEHGSHHTDAIVAEDAKTAAKFLGEVDSAIVLH 379          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_RHOPB (Gamma-glutamyl phosphate reductase OS=Rhodopseudomonas palustris (strain BisB18) GN=proA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.879e-25
Identity = 65/150 (43.33%), Postives = 90/150 (60.00%), Query Frame = 3
Query:   12 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGG---PRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            ++PV  H +GI HVYVD++A+LD+AK+IV++AK+  P  C A ETLL+ +  A N  L  LV  L   G  + G     R    +K      +  EY + + +V++VD V AA+ HI QHGS HT+ IV  DQ VA  FL +VD+A V H
Sbjct:  235 RVPVFAHLEGINHVYVDRAADLDMAKSIVLNAKMRRPGVCGAAETLLIDRAAASN--LAPLVTTLLEAGCEVRGDDAVQRVDPRVKPVAEEDWDTEYEAAIMSVKLVDGVDAALAHIAQHGSHHTEAIVTADQSVASKFLNEVDAAIVLH 382          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_GEOSL (Gamma-glutamyl phosphate reductase OS=Geobacter sulfurreducens GN=proA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.879e-25
Identity = 60/154 (38.96%), Postives = 95/154 (61.69%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLA------CNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            E+++IPV+ H  G+CHV+VD  A+ D+A+ I+++ K+  P  CNA+ETLLVHKD+A          L EL VEL+ +       P+A+K  +      +H EY  ++  V +VDD+  A+ HI+++GS HT+ IV  D   A+ F+ +V+S+ V
Sbjct:  216 ENSRIPVIKHYKGVCHVFVDADADFDMAEKIIVNGKVQRPGVCNALETLLVHKDIAETFIPRIAETLIELKVELRGDDCVRQFVPQATKATEDD----WHAEYLELILAVRVVDDLDEAVAHINRYGSLHTEAIVTRDYHNAQRFIREVNSSTV 365          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_SCHPO (Probable gamma-glutamyl phosphate reductase OS=Schizosaccharomyces pombe GN=pro1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 5.066e-25
Identity = 56/159 (35.22%), Postives = 98/159 (61.64%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK-IPETRL---------FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVF 449
            ++TKIPVLGHA G+C +YV + A++++A  +V+D K DYPAACNA+ETLL++ +   +  L ++   L    V L   P + K+LK +P+            ++ E++ ++  ++ V  +++A+ HI+ HGS HTDCI+   +  A  F+  +D++ V+
Sbjct:  215 DNTKIPVLGHAAGLCSMYVHEDADMELASKLVLDGKTDYPAACNAIETLLIN-EAVLSSHLPKIAETLTEAKVTLKCDPASLKVLKDMPKVSALVEPSVDQDYNTEFSDLILAIKTVPSLQSAMQHINTHGSKHTDCIITSSEAAANRFMAGIDASGVY 372          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_MOOTA (Gamma-glutamyl phosphate reductase OS=Moorella thermoacetica (strain ATCC 39073) GN=proA PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 5.066e-25
Identity = 59/152 (38.82%), Postives = 93/152 (61.18%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVF 449
            E+  +PV+    G CHVYVD  A+LD+A+ IVI+AK   P  CNAMETLLVH+ +A +  L  L   L+ +GV + G  R   ++   E      +  EY  ++  + +VD + +A++HIH++G+ H++ IV  + + A  FL +VD+AAV+
Sbjct:  216 ENATVPVIETGVGNCHVYVDAEADLDMAQRIVINAKTQRPGVCNAMETLLVHEKVA-DSFLPSLAAALKEKGVTIRGCERTRAIIPWAEVATETDWATEYLDLILAIRVVDSLESALEHIHRYGTKHSEAIVTTNYQTAREFLARVDAAAVY 366          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_GEOLS (Gamma-glutamyl phosphate reductase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=proA PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 5.066e-25
Identity = 61/154 (39.61%), Postives = 95/154 (61.69%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACN------GALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            E+++IPV+ H  G+CH++VD SA+ ++A  I+I+AK   P  CNA+ETLL+HKD+A         +L EL VEL+ +       P A    K+     +  EY  ++   ++VDD+ AAIDHI+Q+GS H++ IV  D   A+ F+ +V+S+ V
Sbjct:  216 ENSRIPVIKHYKGVCHLFVDASADFEMATRIIINAKTQRPGVCNALETLLIHKDVAATFIPPFAKSLGELQVELRGDEEFRKYAPAA----KVATEEDWAAEYLELILACKVVDDMDAAIDHINQYGSLHSEVIVTRDYANAQRFIREVNSSCV 365          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_METCA (Gamma-glutamyl phosphate reductase OS=Methylococcus capsulatus GN=proA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.616e-25
Identity = 66/149 (44.30%), Postives = 89/149 (59.73%), Query Frame = 3
Query:    9 TKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK--IPETRL-FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            ++IPV+ H DGICHVY+D  A+L  A+ I I+AK      CNAMETLLV   +A    L +L    + +GV L G P   +L+   +P T   +  EY + +  V +V  +  AI+HIH+HGS HTD IV ED   A  FL +VDSA+V
Sbjct:  230 SRIPVIKHLDGICHVYIDDGADLAKARRIAINAKTQRYGVCNAMETLLVAAGIA-PAVLPDLAALYRDKGVELRGCPETCRLVPDCVPATEADWDTEYLAPILAVRVVAGLDEAIEHIHRHGSGHTDAIVTEDYGRARRFLREVDSASV 377          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_METBF (Gamma-glutamyl phosphate reductase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=proA PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.129e-24
Identity = 63/156 (40.38%), Postives = 93/156 (59.62%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK----IPETRLFHH----EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            E+TKI VLGH  GICH+YVD+  +LD A  +  DAK+ YPA CNA+ETLL+++ +A +  L ++       GV L     +  LL+     P +R        EYN ++ ++++VD ++ AIDHI+  GS HTD I+ ED    + F   VDS++V
Sbjct:  217 ENTKISVLGHTSGICHIYVDEYVDLDTAWKVCFDAKVQYPAVCNAIETLLINRKIA-DTFLPKMAEMYLSAGVELRCDEDSYALLEKRGLSPLSRATEEDWSLEYNDLILSIKLVDTIKEAIDHINTFGSHHTDGIITEDASRRKAFTALVDSSSV 371          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_CLOAB (Gamma-glutamyl phosphate reductase OS=Clostridium acetobutylicum GN=proA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.474e-24
Identity = 61/152 (40.13%), Postives = 98/152 (64.47%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK--IPET-RLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVF 449
            E++ +PV+    G CHVYVDK A+ D A+ I+I+AK+  PA CNAME+LLVHKD+A +  L  +  +L+   V + G     K++K  +P T   F  E+  ++ +V++VD +  AIDHI ++ + H++ I+ E+   A+ FL +VD+AAV+
Sbjct:  216 ENSSVPVIETGTGNCHVYVDKYADFDKAERIIINAKLQRPAVCNAMESLLVHKDVA-HEFLPRISSKLKELKVQIRGCAATQKIVKDIVPATDEDFGKEFLDLILSVKVVDSLEEAIDHIFKYSTKHSEAIITENYTNAQRFLKEVDAAAVY 366          
The following BLAST results are available for this feature:
BLAST of CX300457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_GEOMG1.741e-2539.61Gamma-glutamyl phosphate reductase OS=Geobacter me... [more]
PROA_RHOPS2.274e-2545.33Gamma-glutamyl phosphate reductase OS=Rhodopseudom... [more]
PROA_RHOPB3.879e-2543.33Gamma-glutamyl phosphate reductase OS=Rhodopseudom... [more]
PROA_GEOSL3.879e-2538.96Gamma-glutamyl phosphate reductase OS=Geobacter su... [more]
PROA_SCHPO5.066e-2535.22Probable gamma-glutamyl phosphate reductase OS=Sch... [more]
PROA_MOOTA5.066e-2538.82Gamma-glutamyl phosphate reductase OS=Moorella the... [more]
PROA_GEOLS5.066e-2539.61Gamma-glutamyl phosphate reductase OS=Geobacter lo... [more]
PROA_METCA6.616e-2544.30Gamma-glutamyl phosphate reductase OS=Methylococcu... [more]
PROA_METBF1.129e-2440.38Gamma-glutamyl phosphate reductase OS=Methanosarci... [more]
PROA_CLOAB1.474e-2440.13Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]

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Properties
Property NameValue
Genbank descriptionC07010D12SK SaltLeaf1 Citrus clementina cDNA clone C07010D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300457 ID=CX300457; Name=CX300457; organism=Citrus clementina; type=EST; length=453bp
AGGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAATTTGTCAT
GTTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAACATTGTTAT
TGATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGAAACTCTTC
TGGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGCTTGTTGTA
GAACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGAGCAAGTAA
ATTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTACAACTCAA
TGGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTATTGACCAT
ATTCATCAACATGGAAGTGCCCATACTGATTGCATTGTTGCAGAAGATCA
AAAAGTTGCTGAAACATTTTTATGTCAAGTTGACAGTGCTGCAGTATTTC
ATA
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