CX300457

Overview
NameCX300457
Unique NameCX300457
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length453
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:1543..1995. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_MAGSA (Gamma-glutamyl phosphate reductase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=proA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 7.315e-24
Identity = 69/150 (46.00%), Postives = 92/150 (61.33%), Query Frame = 3
Query:    9 TKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGA-LNELVVELQHEGVGLFGGP--RASKLLKIPETRL-FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            ++IP+  H +GICH YVD SA+L++AK IV++AK+     C A ETLLV  D AC G  L  LV  L   G  + G    +A+    IP +   +  EY   + +V +VD V AA++HI+ HGS HT+ IVAED +VAETFL   DSA V
Sbjct:  222 SRIPLFQHLEGICHTYVDGSADLEMAKTIVLNAKMRRTGICGATETLLV--DRACAGTHLAPLVAMLIDAGCEVRGDAVAQAADARVIPASDADWSTEYLDAIISVGVVDGVGAAVEHINTHGSHHTEAIVAEDSQVAETFLNGCDSAIV 369          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_DESOH (Gamma-glutamyl phosphate reductase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=proA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 7.315e-24
Identity = 61/151 (40.40%), Postives = 88/151 (58.28%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL---KIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            + + IPVL H  G+CHVYVD+ A++++A+ I  +AK+  P  CNAMETLLVH+D A    L ++  +    GV L G      LL   +  E   ++ EY  ++  V++VD + AAI HI  +GS+HT+ IV      A  FL  VDS+ V
Sbjct:  216 QHSSIPVLKHYKGVCHVYVDQDADMEMARAICFNAKVQRPGVCNAMETLLVHRD-AAQRFLPDMARQFADAGVALRGCAATRALLPGIETAEEADWYAEYLDLILAVKVVDSMDAAISHIATYGSSHTEVIVTNSYDRAMRFLAAVDSSVV 365          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_RHOPT (Gamma-glutamyl phosphate reductase OS=Rhodopseudomonas palustris (strain TIE-1) GN=proA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 9.554e-24
Identity = 64/150 (42.67%), Postives = 86/150 (57.33%), Query Frame = 3
Query:   12 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            ++PV  H +G+ HVYVD+SA+L++AK+IV++AK+     C A ETLL+ +  A    L  LV  L   G  + G     K+   +K      +  EY   V   ++VD V  AI HIH HGS HTD IVAED + A  FL +VDSA V H
Sbjct:  231 RVPVFAHLEGVNHVYVDRSADLEMAKSIVLNAKMRRTGVCGAAETLLIDR-AAATTHLAPLVTMLIDSGCEVRGDQTVQKVDPRVKPASDEDWDTEYLDAVIAAKLVDGVDGAIAHIHNHGSHHTDAIVAEDVQAAAKFLGEVDSAIVLH 379          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_GEOBB (Gamma-glutamyl phosphate reductase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=proA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 9.554e-24
Identity = 56/154 (36.36%), Postives = 95/154 (61.69%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLA------CNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            E++KIPV+ H  G+CH++VD +A+ ++A+ I+++AK   P  CNA+ETLL+HKD+A         AL+ L VEL+ +       P+A+K  +      ++ EY  ++    +VD + AAIDHI+++ S HT+ I+  D   ++ F+ +V+S  V
Sbjct:  216 ENSKIPVIKHYKGVCHIFVDATADFEMAREIIVNAKTQRPGVCNALETLLIHKDIAETFVPFIYEALSSLKVELRGDKTFRQFAPKAAKATE----EDWYAEYLELILAAAVVDGLDAAIDHINRYSSLHTESIITGDYANSQRFIREVNSGVV 365          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_CLOK5 (Gamma-glutamyl phosphate reductase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=proA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.248e-23
Identity = 60/154 (38.96%), Postives = 95/154 (61.69%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL-----FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVF 449
            E++ +PV+    G CHVYVD SA+L +A+NIVI+AK   P  CNAMETLLVH+ +A    +  L   L   GV + G  +  +L  IP+ RL     +  E+  ++  V++V  +  A+DHI+++G+ H++ I+  D   ++ FL +VD+AAV+
Sbjct:  216 ENSTVPVIETGIGNCHVYVDSSADLTMAENIVINAKTQRPGVCNAMETLLVHEAVA-EKLIPHLTETLSKMGVEIRGCLKTKRL--IPDIRLATAEDYAQEFLDLILAVKVVSSLDEALDHIYKYGTKHSEAIITNDYTSSQRFLREVDAAAVY 366          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_CLOK1 (Gamma-glutamyl phosphate reductase OS=Clostridium kluyveri (strain NBRC 12016) GN=proA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.248e-23
Identity = 60/154 (38.96%), Postives = 95/154 (61.69%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL-----FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVF 449
            E++ +PV+    G CHVYVD SA+L +A+NIVI+AK   P  CNAMETLLVH+ +A    +  L   L   GV + G  +  +L  IP+ RL     +  E+  ++  V++V  +  A+DHI+++G+ H++ I+  D   ++ FL +VD+AAV+
Sbjct:  216 ENSTVPVIETGIGNCHVYVDSSADLTMAENIVINAKTQRPGVCNAMETLLVHEAVA-EKLIPHLTETLSKMGVEIRGCLKTKRL--IPDIRLATAEDYAQEFLDLILAVKVVSSLDEALDHIYKYGTKHSEAIITNDYTSSQRFLREVDAAAVY 366          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_PSEU5 (Gamma-glutamyl phosphate reductase OS=Pseudomonas stutzeri (strain A1501) GN=proA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.630e-23
Identity = 63/149 (42.28%), Postives = 89/149 (59.73%), Query Frame = 3
Query:   12 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL----KIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            ++PV+ H DGICHVYVD +A++D A  I  +AK    A CN METLLVH+ +A    L  L    + +GV L G PR   LL           +  EYN+ + ++ ++D +  AI+HI+++GS HTD IV E+   A  FL +VDSA+V
Sbjct:  221 RVPVIKHLDGICHVYVDLAADVDKAIRIADNAKTQRFAPCNTMETLLVHQGIA-EQVLPPLAAIYRDKGVELRGCPRTRALLGNEVLAASEEDWSTEYNAPILSIRMLDSLDEAIEHINRYGSQHTDAIVTENFTDARRFLTEVDSASV 368          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_PSEFS (Gamma-glutamyl phosphate reductase OS=Pseudomonas fluorescens (strain SBW25) GN=proA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.630e-23
Identity = 65/149 (43.62%), Postives = 92/149 (61.74%), Query Frame = 3
Query:   12 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL---KIPETRL-FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            K+PV+ H DG+CHV++D +A++D A  I  +AK    A CN METLLVH  +A +  L  L    + +GV L G  R   LL    I  T L ++ EY + + +++IVDD+  AI+HI+ +GS HTD IV+E    A  FL +VDSA+V
Sbjct:  221 KVPVIKHLDGVCHVFIDIAADIDKAIRIADNAKTHRYAPCNTMETLLVHVGIA-DRVLPPLAAIYRDKGVELRGCERTRALLGADVIEATELDWYTEYTAPILSIKIVDDLDEAIEHINTYGSKHTDAIVSEHFSDARRFLNEVDSASV 368          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_PSEA7 (Gamma-glutamyl phosphate reductase OS=Pseudomonas aeruginosa (strain PA7) GN=proA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.630e-23
Identity = 62/149 (41.61%), Postives = 86/149 (57.72%), Query Frame = 3
Query:   12 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL----FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            ++PV+ H DGICHVY+D +A+LD A  +  +AK    A CN METLLVH  +A    L  L    + +GV L G      LL           +  EYN+ + ++ IVD + AAI+HI+ +GS HTD I+ E+   A  FL +VDSA+V
Sbjct:  221 RVPVIKHLDGICHVYIDVAADLDKAIRVADNAKTQRYAPCNTMETLLVHAGIA-ERVLPPLAAIYREKGVELRGDAATRALLGADVLEATEEDWRTEYNAPILSIRIVDGLGAAIEHINTYGSQHTDAIITENFSDARRFLAEVDSASV 368          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_PHOLL (Gamma-glutamyl phosphate reductase OS=Photorhabdus luminescens subsp. laumondii GN=proA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.630e-23
Identity = 60/156 (38.46%), Postives = 93/156 (59.62%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL-------FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVF 449
            E + IPV+    G+CH +VD+SA+ D A  ++ +AK+  P+ACNA+ETLLVH+ +A +  L  L   ++ +GV L     A   LK    ++       +  E+ S+   VEIV D+  AIDHI  +G++H+D I+ +    A+ F+ QVDSAAV+
Sbjct:  211 EQSTIPVITGGIGVCHTFVDESADFDKALTVITNAKVQRPSACNALETLLVHQKIAAD-FLPALSKYMEEQGVTLHASKSAMVFLKDGAAKVVDVTEADYRDEWLSLDMNVEIVSDMEQAIDHIRTYGTSHSDAILTQSLHNADYFVRQVDSAAVY 365          
The following BLAST results are available for this feature:
BLAST of CX300457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_MAGSA7.315e-2446.00Gamma-glutamyl phosphate reductase OS=Magnetospiri... [more]
PROA_DESOH7.315e-2440.40Gamma-glutamyl phosphate reductase OS=Desulfococcu... [more]
PROA_RHOPT9.554e-2442.67Gamma-glutamyl phosphate reductase OS=Rhodopseudom... [more]
PROA_GEOBB9.554e-2436.36Gamma-glutamyl phosphate reductase OS=Geobacter be... [more]
PROA_CLOK51.248e-2338.96Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_CLOK11.248e-2338.96Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_PSEU51.630e-2342.28Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]
PROA_PSEFS1.630e-2343.62Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]
PROA_PSEA71.630e-2341.61Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]
PROA_PHOLL1.630e-2338.46Gamma-glutamyl phosphate reductase OS=Photorhabdus... [more]

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Properties
Property NameValue
Genbank descriptionC07010D12SK SaltLeaf1 Citrus clementina cDNA clone C07010D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300457 ID=CX300457; Name=CX300457; organism=Citrus clementina; type=EST; length=453bp
AGGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAATTTGTCAT
GTTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAACATTGTTAT
TGATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGAAACTCTTC
TGGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGCTTGTTGTA
GAACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGAGCAAGTAA
ATTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTACAACTCAA
TGGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTATTGACCAT
ATTCATCAACATGGAAGTGCCCATACTGATTGCATTGTTGCAGAAGATCA
AAAAGTTGCTGAAACATTTTTATGTCAAGTTGACAGTGCTGCAGTATTTC
ATA
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