CX300457

Overview
NameCX300457
Unique NameCX300457
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length453
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:1543..1995. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_GEOSM (Gamma-glutamyl phosphate reductase OS=Geobacter sp. (strain M21) GN=proA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.630e-23
Identity = 56/154 (36.36%), Postives = 94/154 (61.04%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLA------CNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            E++KIPV+ H  G+CH++VD +A+ ++A+ I+++AK   P  CNA+ETLL+HKD+A         AL  L VEL+ +       P+A+K  +      ++ EY  ++    +VD + AAIDHI+++ S HT+ I+  D   ++ F+ +V+S  V
Sbjct:  216 ENSKIPVIKHYKGVCHIFVDATADFEMAREIIVNAKTQRPGVCNALETLLIHKDIAETFVPFIYEALTTLKVELRGDKTFRQFAPKAAKATE----EDWYAEYLELILAAAVVDGLDAAIDHINRYSSLHTESIITGDYANSQRFIREVNSGVV 365          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_SILPO (Gamma-glutamyl phosphate reductase OS=Silicibacter pomeroyi GN=proA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.128e-23
Identity = 61/154 (39.61%), Postives = 87/154 (56.49%), Query Frame = 3
Query:   12 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACN------GALNELVVELQHEGV-GLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            ++PV  H +GI H+Y+DK+A+ + A  +V++AK      C A E LL+HKD+A N       AL E  VE++ EG+ G      A           +  EY  M+   ++VDDV AAI HI Q+GS HTDC++ ED  VA  F  ++DSA + H
Sbjct:  223 RVPVFAHLEGIVHIYIDKAADPEKALRVVMNAKTRRTGICGAAECLLIHKDIADNLGADLVRALIEAGVEVRAEGLPGSLAATEAD----------WGKEYLDMIIAAKVVDDVDAAIAHIRQYGSNHTDCVITEDDAVAARFFERLDSAILMH 366          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_PSEP1 (Gamma-glutamyl phosphate reductase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=proA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.128e-23
Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = 3
Query:   12 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI-PETRL-FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            ++PV+ H DGICH+YV + A+LD A N+  +AK      C AMETLLV + +A    L E+      +GV L G  R   ++   P T   +H EY   + ++ +VD +  AIDHI+ +GS HTD I++E Q  A  F+ +VDSA+V
Sbjct:  221 RVPVIKHLDGICHIYVSQHADLDKAWNVAFNAKTYRYGICGAMETLLVDQQVA-ERFLPEMARRFVEKGVELRGCERTQAIISAKPATEADWHTEYLDAILSIRVVDGLNQAIDHINHYGSHHTDSIISEHQGEARQFMAEVDSASV 366          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_RHOPA (Gamma-glutamyl phosphate reductase OS=Rhodopseudomonas palustris GN=proA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.780e-23
Identity = 63/150 (42.00%), Postives = 86/150 (57.33%), Query Frame = 3
Query:   12 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            ++PV  H +G+ HVYVD+SA+L++AK+IV++AK+     C A ETLL+ +  A    L  LV  L   G  + G     ++   +K      +  EY   V   ++VD V  AI HIH HGS HTD IVAED + A  FL +VDSA V H
Sbjct:  231 RVPVFAHLEGVNHVYVDRSADLEMAKSIVLNAKMRRTGVCGAAETLLIDR-AAATTHLAPLVTMLIDSGCEVRGDQTVQQVDPRVKPASDEDWDTEYLDAVIAAKLVDGVDGAIVHIHNHGSHHTDAIVAEDAQAAAKFLGEVDSAIVLH 379          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_HELHP (Gamma-glutamyl phosphate reductase OS=Helicobacter hepaticus GN=proA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.780e-23
Identity = 56/148 (37.84%), Postives = 94/148 (63.51%), Query Frame = 3
Query:   15 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVG-LFGGPRASKLLKIPETRL--FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVF 449
            IP++ H  G+CH Y+ KSANLD+A N+V++AK+ YPAACNA E +L+ + L   G L +L+ +L+   V  +F      K   I +  L  F  E+   +  +++V+ +  A++HI   GSAH++ I+ +D+ +A+TF+ +VD+A V+
Sbjct:  215 IPIIKHDKGVCHTYIHKSANLDMALNVVLNAKLSYPAACNACECILLDEVLV-EGFLPKLLTKLREADVRVMFENEVWLKNWGIADDGLADFSKEWGDKILNLKVVNGIDEALEHIAHFGSAHSESIITQDEVIAQTFMREVDAACVY 361          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_METAC (Gamma-glutamyl phosphate reductase OS=Methanosarcina acetivorans GN=proA PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.630e-23
Identity = 63/157 (40.13%), Postives = 94/157 (59.87%), Query Frame = 3
Query:    3 ESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELV-------VELQ--HEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            ++TKIPVLGH  GICH+YVD+ A+ D A  +  DAK+ YPA CNA+ETLLV++ +A    L ++        VEL+   +   L      S L K  E   +  EYN ++ ++++VD ++ AI HI+  GS HTD I+ E+    + F+  VDS++V
Sbjct:  217 DNTKIPVLGHTSGICHIYVDEFADPDTAWKVCFDAKVQYPAVCNAIETLLVNRKIA-EAFLPKMAEMYIKAGVELRCDKDSYILLAEKGLSPLSKATEED-WSLEYNDLILSIKLVDTIKEAIAHINTFGSHHTDGIITENASRRKEFIGLVDSSSV 371          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_SACD2 (Gamma-glutamyl phosphate reductase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=proA PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 4.741e-23
Identity = 61/152 (40.13%), Postives = 92/152 (60.53%), Query Frame = 3
Query:   12 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL-------FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            ++ V+ H DGICHVYVDK+ANLD A NIVI++K      CNAMET+LV + +A +  L     E    GV L G  +   LL   +  +       +  EY + + ++++V ++  AI+HI+ HGS HTD +V+E+  +A  FL +VDS++V
Sbjct:  219 RVSVIKHLDGICHVYVDKTANLDKAFNIVINSKTHRYGVCNAMETMLVDEAIAAD-FLPRAAKEFAARGVELRGCEKTVALLTASDIPVVAALEEDWDTEYLAPILSIKLVANMDEAIEHINNHGSHHTDALVSENYTLARKFLTEVDSSSV 369          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_BRASO (Gamma-glutamyl phosphate reductase OS=Bradyrhizobium sp. (strain ORS278) GN=proA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 4.741e-23
Identity = 64/150 (42.67%), Postives = 86/150 (57.33%), Query Frame = 3
Query:   12 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGP--RASKLLKIPETRL-FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 452
            ++PV  H +G+ HVYVD +A+LD+AK+IV++AK+     C A ETLL+  D A    +  LV  L   G  + G    RA+     P     +  EY   +   ++VD V  AI HIH HGS HTD IV +D KVA+ FL +VDSA V H
Sbjct:  231 RVPVFAHLEGVNHVYVDGAADLDMAKSIVLNAKMRRTGVCGAAETLLI--DRASQDKIKPLVDMLIGAGCEVRGDEAVRAADARVTPANNEDWDTEYLDAIIAAKVVDGVDGAIAHIHAHGSHHTDAIVTQDNKVADKFLNEVDSAIVLH 378          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_PSEPK (Gamma-glutamyl phosphate reductase OS=Pseudomonas putida (strain KT2440) GN=proA PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 6.192e-23
Identity = 59/147 (40.14%), Postives = 87/147 (59.18%), Query Frame = 3
Query:   12 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI-PETRL-FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            ++PV+ H DGICH+YV + A+LD A N+  +AK      C AMETLLV + +A    L E+      +GV L G  R   ++   P T   +H EY   + ++ +VD +  AI+HI+ +GS HTD I++E Q  A  F+ +VDSA+V
Sbjct:  221 RVPVIKHLDGICHIYVSQHADLDKAWNVAFNAKTYRYGICGAMETLLVDQQVA-ERFLPEMARRFVEKGVELRGCERTQAIISAKPATEADWHTEYLDAILSIRVVDGLNQAIEHINHYGSHHTDSIISEHQGEARQFMAEVDSASV 366          
BLAST of CX300457 vs. ExPASy Swiss-Prot
Match: PROA_PSEMY (Gamma-glutamyl phosphate reductase OS=Pseudomonas mendocina (strain ymp) GN=proA PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 6.192e-23
Identity = 64/150 (42.67%), Postives = 88/150 (58.67%), Query Frame = 3
Query:   12 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPR-----ASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 446
            K+PV+ H DG+CHVYVD +A+LD A  +  +AK    + CN METLLVH+ +A    L  L    + +GV L G         S +L+  E   F  EYN+ +  + IVD + AAI+HI+ +GS HTD I+ E    A  FL +VDSA+V
Sbjct:  221 KVPVIKHLDGVCHVYVDIAADLDKAIRVCDNAKTQRYSPCNTMETLLVHQAIA-ERVLPPLAAIYRDKGVELRGDAATRALLGSDVLEASEDDWF-AEYNAPILAIRIVDSLDAAIEHINHYGSHHTDSIITEHFSDARRFLTEVDSASV 368          
The following BLAST results are available for this feature:
BLAST of CX300457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_GEOSM1.630e-2336.36Gamma-glutamyl phosphate reductase OS=Geobacter sp... [more]
PROA_SILPO2.128e-2339.61Gamma-glutamyl phosphate reductase OS=Silicibacter... [more]
PROA_PSEP12.128e-2340.82Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]
PROA_RHOPA2.780e-2342.00Gamma-glutamyl phosphate reductase OS=Rhodopseudom... [more]
PROA_HELHP2.780e-2337.84Gamma-glutamyl phosphate reductase OS=Helicobacter... [more]
PROA_METAC3.630e-2340.13Gamma-glutamyl phosphate reductase OS=Methanosarci... [more]
PROA_SACD24.741e-2340.13Gamma-glutamyl phosphate reductase OS=Saccharophag... [more]
PROA_BRASO4.741e-2342.67Gamma-glutamyl phosphate reductase OS=Bradyrhizobi... [more]
PROA_PSEPK6.192e-2340.14Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]
PROA_PSEMY6.192e-2342.67Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]

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Properties
Property NameValue
Genbank descriptionC07010D12SK SaltLeaf1 Citrus clementina cDNA clone C07010D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300457 ID=CX300457; Name=CX300457; organism=Citrus clementina; type=EST; length=453bp
AGGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAATTTGTCAT
GTTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAACATTGTTAT
TGATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGAAACTCTTC
TGGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGCTTGTTGTA
GAACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGAGCAAGTAA
ATTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTACAACTCAA
TGGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTATTGACCAT
ATTCATCAACATGGAAGTGCCCATACTGATTGCATTGTTGCAGAAGATCA
AAAAGTTGCTGAAACATTTTTATGTCAAGTTGACAGTGCTGCAGTATTTC
ATA
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