CX300460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.314e-13 Identity = 35/86 (40.70%), Postives = 58/86 (67.44%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSA-DTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 +N EF L + M++ +P L +V+ +V+E++ +M+ENIEK+L+RG++IELLVDKT ++ A FR Q ++RR +W +N Sbjct: 171 LNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFEN 256
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.314e-13 Identity = 35/86 (40.70%), Postives = 58/86 (67.44%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSA-DTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 +N EF L + M++ +P L +V+ +VSE++ +M+ENIEK+L+RG++IELLVDKT ++ A FR ++RR +W++N Sbjct: 106 LNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQN 191
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13 Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 MN EFS VL Q++ S N D + + +V E++ IMV NI+ + +RG+R+ELL+DKT + D + F+ S+ L RA+ MKN Sbjct: 102 MNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKN 186
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13 Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 MN EFS VL Q++ S N D + + +V E++ IMV NI+ + +RG+R+ELL+DKT + D + F+ S+ L RA+ MKN Sbjct: 102 MNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKN 186
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13 Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 MN EFS VL Q++ S N D + + +V E++ IMV NI+ + +RG+R+ELL+DKT + D + F+ S+ L RA+ MKN Sbjct: 102 MNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKN 186
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.993e-13 Identity = 34/85 (40.00%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 MN EFS VL Q+++ S + D + + +V E++ IMV NI+ + +RG+++ELL+DKT + D + F+ S+ L RA+ MKN Sbjct: 102 MNSEFSSVLAAQLKYHSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKN 186
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VAM7A_DICDI (Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum GN=vamp7A PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12 Identity = 34/83 (40.96%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 7 DEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 D F RVL ++M+++S NP ++ +N V +VSE + + + IEK + RG++IE++VDKT +Q +F F+ S L+R LW +N Sbjct: 106 DPFIRVLEERMKYYS-NPKSNKMNLVMDQVSEAKGALTDAIEKTIHRGEKIEIIVDKTERLQSESFVFKSNSVALKRKLWWQN 187
BLAST of CX300460 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11 Identity = 30/86 (34.88%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 1 MNDEFSRVLHQQMEFFSSNPSA-DTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 255 +N EF V+ + M + + + L +V+ +VSE+++IM+ENI+K ++RG+ + +L DKT ++ A ++KQ ++RR LW +N Sbjct: 107 LNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQN 192 The following BLAST results are available for this feature:
BLAST of CX300460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300460 ID=CX300460; Name=CX300460; organism=Citrus clementina; type=EST; length=591bpback to top |