CX300464

Overview
NameCX300464
Unique NameCX300464
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length583
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX300464 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.819e-36
Identity = 82/190 (43.16%), Postives = 114/190 (60.00%), Query Frame = 1 
Query:   16 ESLVKAIKQ--VDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGIDDDRIHGAVEPAKSTYDVKAKIRRAVEAEGIPYTYVASYGLNGHFLPNLSQPEATAPPRDKVVILGDGNPKAVYNKEDDVATFTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSMWERKIGKTLEREYVSEEQLLKNIQE 579
            E + K +K+  +DVVIS VG   + DQ+ ++ AIK    +KRF PSEFG D DR    VEP  + Y  K  +RRAVE  GIP+T +    +      +   P    PP D+  I GDGN KA +   +D+  FT+K +DD RTLNKN++ +P  N YS N+L S+WE+KIG+TL R  V+ ++LL +  E
Sbjct:   75 ECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTD-PVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRPSSNCYSINELASLWEKKIGRTLPRFTVTADKLLAHAAE 263
The following BLAST results are available for this feature:
BLAST of CX300464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN1.819e-3643.16Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionC07010E07SK SaltLeaf1 Citrus clementina cDNA clone C07010E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300464 ID=CX300464; Name=CX300464; organism=Citrus clementina; type=EST; length=583bp
GATGTTTTGAATCACGAGAGTTTGGTGAAGGCGATAAAACAAGTGGACGT
GGTGATATCAACAGTTGGTCACACTTTAATAGCCGATCAGGTCAAGATTA
TTGCTGCCATTAAAGAAGCCGGCAACGTTAAGAGATTCTTCCCGTCGGAA
TTTGGAATTGATGATGATCGAATCCATGGAGCCGTAGAGCCAGCAAAATC
AACGTATGACGTAAAGGCGAAAATCCGCCGAGCCGTTGAGGCAGAAGGCA
TTCCGTATACTTATGTAGCATCGTACGGTTTGAATGGCCACTTCCTTCCC
AATTTGTCGCAGCCTGAGGCCACTGCCCCCCCTAGGGATAAGGTCGTCAT
CTTAGGTGATGGAAATCCAAAAGCTGTTTATAACAAGGAAGATGATGTTG
CAACCTTCACCATCAAAGCGGTTGACGATCCGAGAACCTTGAACAAAAAC
CTTTACATTCAGCCTCCCGGCAATATTTACTCGTTCAATGATCTTGTGTC
TATGTGGGAGAGAAAGATTGGCAAAACCCTCGAAAGGGAGTATGTTTCAG
AAGAGCAGCTCCTAAAGAATATTCAAGAAGCTG
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