CX300467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_AERHH (Malate dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=mdh PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 6.306e-23 Identity = 54/119 (45.38%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 18 SFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 SFT +E +T RIQN GTEVVEAKAG GSATLSM AA F + ++GL+G+A V+ECA+V FFA + LG+ G E + G L+ +E+ ++ L IQ G+ F K Sbjct: 193 SFTADEVAAMTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLIKGLQGEANVIECAYVEGDGKHATFFAQPILLGKNGVETVLDYGKLSAFEQEAMDGMLATLKADIQLGVEFVK 311
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHEPA (Malate dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.236e-23 Identity = 59/119 (49.58%), Postives = 70/119 (58.82%), Query Frame = 3 Query: 18 SFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 SFT E LT RIQN GTEVVEAKAG GSATLSM AA F + +RGL+G+A VVECA+V FFA V LG+ G EE+ G ++ +E + L IQ GI F K Sbjct: 193 SFTDAEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANVVECAYVDGGSEHAEFFAQPVVLGKNGVEEVLAYGEVSAFEANARDAMLDTLQADIQLGIDFVK 311
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHEB9 (Malate dehydrogenase OS=Shewanella baltica (strain OS195) GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.236e-23 Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 18 SFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 +FT EE LT RIQN GTEVVEAKAG GSATLSM AA F + +RGL+G+A +VECA+V FFA V LG+ G E++ G ++ +E + L G I+ G+ F K Sbjct: 193 TFTDEEVASLTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANIVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFEANARDSMLDTLKGDIKLGVDFVK 311
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHEB8 (Malate dehydrogenase OS=Shewanella baltica (strain OS185) GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.236e-23 Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 18 SFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 +FT EE LT RIQN GTEVVEAKAG GSATLSM AA F + +RGL+G+A +VECA+V FFA V LG+ G E++ G ++ +E + L G I+ G+ F K Sbjct: 193 TFTDEEVASLTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANIVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFEANARDSMLDTLKGDIKLGVDFVK 311
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHEB5 (Malate dehydrogenase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.236e-23 Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 18 SFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 +FT EE LT RIQN GTEVVEAKAG GSATLSM AA F + +RGL+G+A +VECA+V FFA V LG+ G E++ G ++ +E + L G I+ G+ F K Sbjct: 193 TFTDEEVASLTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANIVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFEANARDSMLDTLKGDIKLGVDFVK 311
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHEB2 (Malate dehydrogenase OS=Shewanella baltica (strain OS223) GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.236e-23 Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 18 SFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 +FT EE LT RIQN GTEVVEAKAG GSATLSM AA F + +RGL+G+A +VECA+V FFA V LG+ G E++ G ++ +E + L G I+ G+ F K Sbjct: 193 TFTDEEVASLTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANIVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFEANARDSMLDTLKGDIKLGVDFVK 311
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SALTY (Malate dehydrogenase OS=Salmonella typhimurium GN=mdh PE=3 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 8.236e-23 Identity = 59/123 (47.97%), Postives = 74/123 (60.16%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 377 P SFT++EA LT RIQN GTEVVEAKAG GSATLSM AA F + +R L+G+ GVVECA+V FF+ + LG+ G EE +G L+ +E+ L+ L IQ G F K Sbjct: 190 PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLDAMLDTLKKDIQLGEDFINK 312
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SALTI (Malate dehydrogenase OS=Salmonella typhi GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.236e-23 Identity = 59/123 (47.97%), Postives = 74/123 (60.16%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 377 P SFT++EA LT RIQN GTEVVEAKAG GSATLSM AA F + +R L+G+ GVVECA+V FF+ + LG+ G EE +G L+ +E+ L+ L IQ G F K Sbjct: 190 PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSTFEQHSLDAMLDTLKKDIQLGEDFINK 312
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SALSV (Malate dehydrogenase OS=Salmonella schwarzengrund (strain CVM19633) GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.236e-23 Identity = 59/123 (47.97%), Postives = 74/123 (60.16%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 377 P SFT++EA LT RIQN GTEVVEAKAG GSATLSM AA F + +R L+G+ GVVECA+V FF+ + LG+ G EE +G L+ +E+ L+ L IQ G F K Sbjct: 190 PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLDAMLDTLKKDIQLGEDFINK 312
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SALPK (Malate dehydrogenase OS=Salmonella paratyphi A (strain AKU_12601) GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.236e-23 Identity = 59/123 (47.97%), Postives = 74/123 (60.16%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 377 P SFT++EA LT RIQN GTEVVEAKAG GSATLSM AA F + +R L+G+ GVVECA+V FF+ + LG+ G EE +G L+ +E+ L+ L IQ G F K Sbjct: 190 PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLDAMLDTLKKDIQLGEDFINK 312 The following BLAST results are available for this feature:
BLAST of CX300467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300467 ID=CX300467; Name=CX300467; organism=Citrus clementina; type=EST; length=504bpback to top |