CX300467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDHM_MOUSE (Malate dehydrogenase, mitochondrial OS=Mus musculus GN=Mdh2 PE=1 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 8.236e-23 Identity = 56/122 (45.90%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 P F Q++ LT RIQ GTEVV+AKAGAGSATLSMAYA F + + + G GVVEC+FV S+ TE +F++ + LG++G E+ +G + +E + +A EL SI+KG F K Sbjct: 214 PKVDFPQDQLATLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVQSKETECTYFSTPLLLGKKGLEKNLGIGKITPFEEKMIAEAIPELKASIKKGEDFVK 335
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHEFN (Malate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=mdh PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.076e-22 Identity = 55/119 (46.22%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 18 SFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 +FT EE +T RIQN GTEVVEAKAG GSATLSM AA F + +RGL+G+A VVECA+V FFA + LG+ G E++ G ++ +E + L G I+ G+ F K Sbjct: 193 TFTDEEVAAMTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANVVECAYVDGGSEHATFFAQPILLGKNGVEKVLPYGEISAFEANARDAMLDTLKGDIKLGVEFVK 311
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SALG2 (Malate dehydrogenase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=mdh PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.076e-22 Identity = 59/123 (47.97%), Postives = 74/123 (60.16%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 377 P SFT++EA LT RIQN GTEVVEAKAG GSATLSM AA F + +R L+G+ GVVECA+V FF+ + LG+ G EE +G L+ +E+ L+ L IQ G F K Sbjct: 190 PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLDAMLYTLKKDIQLGEDFINK 312
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDHM_RAT (Malate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Mdh2 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.076e-22 Identity = 55/122 (45.08%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 P F Q++ LT RIQ GTEVV+AKAGAGSATLSMAYA F + + + G GV+EC+FV S+ TE +F++ + LG++G E+ +G + +E + +A EL SI+KG F K Sbjct: 214 PKVDFPQDQLATLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVIECSFVQSKETECTYFSTPLLLGKKGLEKNLGIGKITPFEEKMIAEAIPELKASIKKGEDFVK 335
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHEWM (Malate dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=mdh PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.405e-22 Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 18 SFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 SF+ EE LT RIQN GTEVVEAKAG GSATLSM AA F + +RGL+G+A VVECA+V FFA + LG+ G E++ G ++E+E + L I+ G+ F K Sbjct: 193 SFSDEEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANVVECAYVDGGSEHAEFFAQPILLGKNGVEKVLAYGDVSEFEANARDAMLDTLNADIKLGVEFVK 311
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHESW (Malate dehydrogenase OS=Shewanella sp. (strain W3-18-1) GN=mdh PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.405e-22 Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 18 SFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 +F+ EE LT RIQN GTEVVEAKAG GSATLSM AA F + +RGL+G+A VVECA+V FFA V LG+ G E++ G ++ +E + L G I+ G+ F K Sbjct: 193 TFSDEEVASLTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGMSLVRGLQGEANVVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFEANARDSMLDTLKGDIKLGVDFVK 311
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHEPW (Malate dehydrogenase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=mdh PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.405e-22 Identity = 58/119 (48.74%), Postives = 70/119 (58.82%), Query Frame = 3 Query: 18 SFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 SFT EE LT RIQN GTEVVEAKAG GSATLSM AA F + +RGL+G+A VVECA+V FFA V LG+ G E++ G ++ +E + L I GI F K Sbjct: 193 SFTDEEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANVVECAYVDGGSEHAEFFAQPVVLGKNGVEQVLAYGDVSAFEANARDAMLDTLKADIDLGIEFVK 311
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHEPC (Malate dehydrogenase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=mdh PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.405e-22 Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 18 SFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 +F+ EE LT RIQN GTEVVEAKAG GSATLSM AA F + +RGL+G+A VVECA+V FFA V LG+ G E++ G ++ +E + L G I+ G+ F K Sbjct: 193 TFSDEEVASLTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGMSLVRGLQGEANVVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFEANARDSMLDTLKGDIKLGVDFVK 311
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHEON (Malate dehydrogenase OS=Shewanella oneidensis GN=mdh PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.405e-22 Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 18 SFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 +F+ EE LT RIQN GTEVVEAKAG GSATLSM AA F + +RGL+G+A VVECA+V FFA V LG+ G E++ G ++ +E + L G I+ G+ F K Sbjct: 193 TFSDEEVASLTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGMSLVRGLQGEANVVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFEANARDSMLDTLKGDIKLGVDFVK 311
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHELP (Malate dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=mdh PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.405e-22 Identity = 57/119 (47.90%), Postives = 71/119 (59.66%), Query Frame = 3 Query: 18 SFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 374 SF+ EE LT RIQN GTEVVEAKAG GSATLSM AA F + +RGL+G+A VVECA+V FFA V LG+ G E++ G ++E+E + L I G+ F K Sbjct: 193 SFSDEEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANVVECAYVDGGSEHADFFAQPVLLGKNGIEQVLAYGEVSEFEANARDAMLDTLKADITLGVDFVK 311 The following BLAST results are available for this feature:
BLAST of CX300467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300467 ID=CX300467; Name=CX300467; organism=Citrus clementina; type=EST; length=504bpback to top |