CX300467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_MORJA (Malate dehydrogenase OS=Moritella japonica GN=mdh PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.972e-22 Identity = 56/116 (48.28%), Postives = 69/116 (59.48%), Query Frame = 3 Query: 21 FTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 368 FT EE LT RIQN GTEVVEAKAG GSATLSM AA F + +R L+G+ G+VEC +V FFA V LG+ G EE+ G L+E+E + +EL +I G F Sbjct: 194 FTAEEIATLTPRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEEGIVECTYVDGGSEHATFFAQPVLLGKNGVEEVLAYGELSEFEANARDAMLEELKANITLGEEF 309
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_HAEI8 (Malate dehydrogenase OS=Haemophilus influenzae (strain 86-028NP) GN=mdh PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.972e-22 Identity = 56/116 (48.28%), Postives = 72/116 (62.07%), Query Frame = 3 Query: 21 FTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 368 + ++E E L RIQN GTEVV AKAG GSATLSMA AA FA + ++GL G+ VVEC +V FF+ VRLG++G EEI +GPL+ +E+ LE L I+ G F Sbjct: 194 WNEDEIEPLAKRIQNAGTEVVNAKAGGGSATLSMAQAAARFARSLVKGLSGET-VVECTYVEGDGKYARFFSQPVRLGKEGVEEILPIGPLSNFEQQALENMLPTLRADIELGEKF 308
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_ECOSM (Malate dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=mdh PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.972e-22 Identity = 58/123 (47.15%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 377 P SFT++E LT RIQN GTEVVEAKAG GSATLSM AA F + +R L+G+ GVVECA+V FF+ + LG+ G EE +G L+ +E+ LE L I G F K Sbjct: 190 PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEKNALEGMLDTLKKDIALGEEFVNK 312
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_ECOLU (Malate dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=mdh PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.972e-22 Identity = 58/123 (47.15%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 377 P SFT++E LT RIQN GTEVVEAKAG GSATLSM AA F + +R L+G+ GVVECA+V FF+ + LG+ G EE +G L+ +E+ LE L I G F K Sbjct: 190 PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEKNALEGMLDTLKKDIALGEEFVNK 312
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_ECO8A (Malate dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=mdh PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.972e-22 Identity = 58/123 (47.15%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 377 P SFT++E LT RIQN GTEVVEAKAG GSATLSM AA F + +R L+G+ GVVECA+V FF+ + LG+ G EE +G L+ +E+ LE L I G F K Sbjct: 190 PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQSALEGMLDTLKKDIALGEEFVNK 312
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_ECO7I (Malate dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=mdh PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.972e-22 Identity = 58/123 (47.15%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 377 P SFT++E LT RIQN GTEVVEAKAG GSATLSM AA F + +R L+G+ GVVECA+V FF+ + LG+ G EE +G L+ +E+ LE L I G F K Sbjct: 190 PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEKNALEGMLDTLKKDIALGEEFVNK 312
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_ECO55 (Malate dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=mdh PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.972e-22 Identity = 58/123 (47.15%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 377 P SFT++E LT RIQN GTEVVEAKAG GSATLSM AA F + +R L+G+ GVVECA+V FF+ + LG+ G EE +G L+ +E+ LE L I G F K Sbjct: 190 PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQSALEGMLDTLKKDIALGEEFVNK 312
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHISS (Malate dehydrogenase OS=Shigella sonnei (strain Ss046) GN=mdh PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 9.106e-22 Identity = 58/123 (47.15%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 377 P SFT++E LT RIQN GTEVVEAKAG GSATLSM AA F + +R L+G+ GVVECA+V FF+ + LG+ G EE +G L+ +E+ LE L I G F K Sbjct: 190 PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHIFL (Malate dehydrogenase OS=Shigella flexneri GN=mdh PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 9.106e-22 Identity = 58/123 (47.15%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 377 P SFT++E LT RIQN GTEVVEAKAG GSATLSM AA F + +R L+G+ GVVECA+V FF+ + LG+ G EE +G L+ +E+ LE L I G F K Sbjct: 190 PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGKEFVNK 312
BLAST of CX300467 vs. ExPASy Swiss-Prot
Match: MDH_SHIF8 (Malate dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=mdh PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 9.106e-22 Identity = 58/123 (47.15%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 9 PPCSFTQEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 377 P SFT++E LT RIQN GTEVVEAKAG GSATLSM AA F + +R L+G+ GVVECA+V FF+ + LG+ G EE +G L+ +E+ LE L I G F K Sbjct: 190 PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGKEFVNK 312 The following BLAST results are available for this feature:
BLAST of CX300467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300467 ID=CX300467; Name=CX300467; organism=Citrus clementina; type=EST; length=504bpback to top |