CX300472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300472 vs. ExPASy Swiss-Prot
Match: RS9_CHLTE (30S ribosomal protein S9 OS=Chlorobium tepidum GN=rpsI PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.981e-13 Identity = 54/140 (38.57%), Postives = 75/140 (53.57%), Query Frame = 1 Query: 82 ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIE-LVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 498 E + GR+KT+VA + G+G I +N P+E + E R +A +P+ + + N D+ I VKGGG T Q A+ +IA+ALV F DE + + R DR LL DPR E KK+G + AR FQ S R Sbjct: 3 EVIDTVGRRKTSVARVFMSPGKGKIVVNKLPVEEYFKDEFKRSQALKPLAVAEKQ--NDFDITINVKGGGLTGQSGAVSLAIARALVEF-----DESIRAAL-----RPDR-LLTRDPRMVERKKYGKKKARKSFQFSKR 129
BLAST of CX300472 vs. ExPASy Swiss-Prot
Match: RS9_METI4 (30S ribosomal protein S9 OS=Methylacidiphilum infernorum (isolate V4) GN=rpsI PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.791e-13 Identity = 49/147 (33.33%), Postives = 75/147 (51.02%), Query Frame = 1 Query: 64 TAAPKTESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEIL-RFKAFEPI-LLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 498 T P+ +Q GR+KTA A K G+G + ING +E P + R++ F+P+ ++ G +F D+ + +GGG Q A++ ++++AL+ + Y K+ LL DPR E KK G GAR RFQ S R Sbjct: 4 TVIPQNSPIQATGRRKTATATVILKPGKGEVSINGKDLEFYFPTFVHRYEVFKPLEVIEGTKKF---DIIAKARGGGLMGQAQALKLAVSRALIKYDPSYRSLLKKE-----------GLLTRDPRMKERKKTGQPGARKRFQFSKR 136
BLAST of CX300472 vs. ExPASy Swiss-Prot
Match: RS9_PELLD (30S ribosomal protein S9 OS=Pelodictyon luteolum (strain DSM 273) GN=rpsI PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.869e-13 Identity = 50/140 (35.71%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 82 ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIE-LVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 498 E + GR+KT+VA + G+G + IN P+E E+ R A P++L + D+++ VKGGG + Q A+ IA+AL F DE ++ +K LL DPR E KKFG + AR FQ S R Sbjct: 3 EVIDTVGRRKTSVARVFMTPGKGRVIINKLPVEEYFRDEVKRLHALRPLVLT--EKTEDFDIKVNVKGGGLSGQSGAVSLGIARALTEF-----DEAARAVLKQ------ERLLTRDPRMVERKKFGRKKARKSFQFSKR 129
BLAST of CX300472 vs. ExPASy Swiss-Prot
Match: RS9_SYNFM (30S ribosomal protein S9 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rpsI PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.158e-12 Identity = 51/134 (38.06%), Postives = 72/134 (53.73%), Query Frame = 1 Query: 100 GRKKTAVAVTYCKRGRGLIKINGCPIE-LVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 498 G++KTAVA + K G G + IN IE ++ E + ++P++L G F +D+ + V GGG + Q AIR I+KAL+ F E +++L R L D R E KK+G R ARARFQ S R Sbjct: 10 GKRKTAVARVWLKPGSGSVTINKRTIEEYIDRETSKMVIYQPLVLTGT--FGKLDVTVNVLGGGGSGQAGAIRHGISKALLEF---------NPEFREVLKR--AGFLTRDSRVKERKKYGRRSARARFQYSKR 130
BLAST of CX300472 vs. ExPASy Swiss-Prot
Match: RS9_CHLPD (30S ribosomal protein S9 OS=Chlorobium phaeobacteroides (strain DSM 266) GN=rpsI PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.513e-12 Identity = 50/140 (35.71%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 82 ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIE-LVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 498 E + GR+KT+VA + G+G + IN P E E+ R +A P+ L + D+++ V GGG + Q A+ +IA+AL F DE ++ +K LL DPR E KKFG + AR RFQ S R Sbjct: 3 EVIDTVGRRKTSVARVFMSPGKGRVIINKLPAEEYFRDEVKRQQALRPLALT--EKMEDFDIKVNVHGGGVSGQTGAVSLAIARALTEF-----DESARAVLKK------EKLLTRDPRMVERKKFGRKKARKRFQFSKR 129
BLAST of CX300472 vs. ExPASy Swiss-Prot
Match: RS9_PELPB (30S ribosomal protein S9 OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=rpsI PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.580e-12 Identity = 51/140 (36.43%), Postives = 74/140 (52.86%), Query Frame = 1 Query: 82 ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIE-LVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 498 E + GR+KT+VA + G+G + +N PIE + E R +A P+++ R D++I V+GGG + Q A+ +IA+AL F DE ++ +K LL DPR E KKFG + AR RFQ S R Sbjct: 3 EVIDTVGRRKTSVARAFMIPGKGRVIVNKLPIEEYFKDEFKRQQALRPLVIT--ERAEEFDIKINVQGGGVSGQSGAVSLAIARALTEF-----DETARVILKT------EKLLTRDPRMVERKKFGRKKARKRFQFSKR 129
BLAST of CX300472 vs. ExPASy Swiss-Prot
Match: RS9_CHLP8 (30S ribosomal protein S9 OS=Chlorobaculum parvum (strain NCIB 8327) GN=rpsI PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.370e-12 Identity = 49/140 (35.00%), Postives = 74/140 (52.86%), Query Frame = 1 Query: 82 ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIE-LVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 498 E + GR+KT+VA + G+G I +N P+E + E R +A +P++ + + D+++ VKGGG T Q A+ +IA+ALV F DE + ++ LL DPR E KK+G + AR FQ S R Sbjct: 3 EVIDTVGRRKTSVARVFMSPGKGKIVVNKLPVEEYFKDEFKRSQALKPLVTAEKQ--DEFDIKVNVKGGGLTGQSGAVCLAIARALVEF-----DESIRPTLR------TERLLTRDPRMVERKKYGKKKARKSFQFSKR 129
BLAST of CX300472 vs. ExPASy Swiss-Prot
Match: RS9_CHLCH (30S ribosomal protein S9 OS=Chlorobium chlorochromatii (strain CaD3) GN=rpsI PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.281e-11 Identity = 50/140 (35.71%), Postives = 76/140 (54.29%), Query Frame = 1 Query: 82 ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIE-LVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 498 E + GR+KT+VA + G+G + +N P+E + E R +A P+ L + D++I V+GGG + Q A+ +IA+AL +S + ++ +L R +R LL DPR E KKFG + AR RFQ S R Sbjct: 3 EVIDTVGRRKTSVARAFLTPGKGTVTVNKRPVEEYFKDEFKRQQALRPLTLC--EKAEEFDVKINVQGGGLSGQSGAVSLAIARALT---------ESDEALRAVL-RTER-LLTRDPRMVERKKFGRKKARKRFQFSKR 129
BLAST of CX300472 vs. ExPASy Swiss-Prot
Match: RS9_GRAFK (30S ribosomal protein S9 OS=Gramella forsetii (strain KT0803) GN=rpsI PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.673e-11 Identity = 49/140 (35.00%), Postives = 73/140 (52.14%), Query Frame = 1 Query: 82 ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPI-ELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 498 E + GR+KTAVA Y G+G I +N + + L +K +P++L D++I V GGG T Q AIR ++++A+VA +DE++ +K LL DPR E KK+G + AR +FQ S R Sbjct: 2 EVIHKIGRRKTAVARVYVSEGKGNITVNKKDLKDYFTTGTLLYKVNQPMMLTENE--GNFDVKINVYGGGITGQAEAIRLALSRAMVA-----LDEENHGALK------PEGLLTRDPRMVERKKYGQKKARKKFQFSKR 128
BLAST of CX300472 vs. ExPASy Swiss-Prot
Match: RS9_PETMO (30S ribosomal protein S9 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=rpsI PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.726e-11 Identity = 54/138 (39.13%), Postives = 73/138 (52.90%), Query Frame = 1 Query: 100 GRKKTAVAVTYCKRGRGLIKINGCPIE-LVE----PEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 498 GR+KTAVA + + G G IKING + LVE E+ +A +P+ + + D+ IRV GGG + Q AIR IA+AL+++ DE + +K LL DPR E KK+G R AR R Q S R Sbjct: 11 GRRKTAVARVHLRPGNGKIKINGKEYKSLVEYLRGNEVWEIEALKPLTVTSTN--GQFDLVIRVNGGGLSGQAGAIRLGIARALLSY-----DESFRPILK------KEGLLTRDPREVERKKYGLRKARKRAQFSKR 135 The following BLAST results are available for this feature:
BLAST of CX300472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300472 ID=CX300472; Name=CX300472; organism=Citrus clementina; type=EST; length=532bpback to top |