CX300477
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO2_CRIGR (Small ubiquitin-related modifier 2 OS=Cricetulus griseus GN=SUMO2 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.694e-18 Identity = 44/81 (54.32%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 8 DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 250 + + HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG Sbjct: 13 ENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 93
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO2_CHICK (Small ubiquitin-related modifier 2 OS=Gallus gallus GN=SUMO2 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.694e-18 Identity = 44/81 (54.32%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 8 DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 250 + + HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG Sbjct: 13 ENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 93
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO2_BOVIN (Small ubiquitin-related modifier 2 OS=Bos taurus GN=SUMO2 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.694e-18 Identity = 44/81 (54.32%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 8 DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 250 + + HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG Sbjct: 13 ENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 93
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO2_DANRE (Small ubiquitin-related modifier 2 OS=Danio rerio GN=sumo2 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.212e-18 Identity = 44/81 (54.32%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 8 DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 250 + + HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG Sbjct: 13 ENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLTMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 93
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO_CAEEL (Small ubiquitin-related modifier OS=Caenorhabditis elegans GN=smo-1 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.194e-17 Identity = 41/81 (50.62%), Postives = 52/81 (64.20%), Query Frame = 2 Query: 8 DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 250 D + +I +KV GQD NEV FR+K T + KL +Y DR V +NS+ FLFDGRR+ + TP LEMED D I+ Q GG Sbjct: 10 DNAEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFDGRRINDDDTPKTLEMEDDDVIEVYQEQLGG 90
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO1_XENTR (Small ubiquitin-related modifier 1 OS=Xenopus tropicalis GN=sumo1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.194e-17 Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = 2 Query: 20 HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 250 +I LKV GQD +E+ F++K +T LKKL +YC RQ V +NS+ FLF+G+R+ QTP EL ME+ D I+ QTGG Sbjct: 22 YIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRISDHQTPKELGMEEEDVIEVYQEQTGG 98
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SMO1B_XENLA (Small ubiquitin-related modifier 1-B OS=Xenopus laevis GN=sumo1-B PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.194e-17 Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = 2 Query: 20 HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 250 +I LKV GQD +E+ F++K +T LKKL +YC RQ V +NS+ FLF+G+R+ QTP EL ME+ D I+ QTGG Sbjct: 22 YIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRISDHQTPKELGMEEEDVIEVYQEQTGG 98
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO4_PIG (Small ubiquitin-related modifier 4 OS=Sus scrofa GN=SUMO4 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.293e-17 Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 2 Query: 8 DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 250 + + HINLKV GQDG+ F+I+R T L KLM AYC+RQ + + I F DG+ + TP +LE+ED D ID + QTGG Sbjct: 13 ENNDHINLKVAGQDGSVAQFKIRRHTPLSKLMKAYCERQGLSIRQIRFRVDGQPINETHTPAQLELEDEDTIDVLQQQTGG 93
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO1_SPETR (Small ubiquitin-related modifier 1 OS=Spermophilus tridecemlineatus GN=SUMO1 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.293e-17 Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 11 QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 250 + +I LKV GQD +E+ F++K +T LKKL +YC RQ V +NS+ FLF+G+R+ TP EL ME+ D I+ QTGG Sbjct: 18 EGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG 97
BLAST of CX300477 vs. ExPASy Swiss-Prot
Match: SUMO1_RAT (Small ubiquitin-related modifier 1 OS=Rattus norvegicus GN=Sumo1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.293e-17 Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 11 QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 250 + +I LKV GQD +E+ F++K +T LKKL +YC RQ V +NS+ FLF+G+R+ TP EL ME+ D I+ QTGG Sbjct: 18 EGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG 97 The following BLAST results are available for this feature:
BLAST of CX300477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300477 ID=CX300477; Name=CX300477; organism=Citrus clementina; type=EST; length=426bpback to top |