CX300484
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300484 vs. ExPASy Swiss-Prot
Match: ASK7_ARATH (SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK7 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.853e-27 Identity = 66/122 (54.10%), Postives = 84/122 (68.85%), Query Frame = 2 Query: 14 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK-HVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMI 376 S KKI LKSSDG+ FE+EE A + QTI HM+E +C D VIP+ NVTS IL VIEYC K HV+A + +++DLK WD +F++ DQ T+F L+ AA L+IK LL L QTVADM+ Sbjct: 2 STKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNKHHVDAA------NPCSDEDLKKWDKEFMEKDQYTIFHLMNAAYDLHIKSLLALAYQTVADMV 117
BLAST of CX300484 vs. ExPASy Swiss-Prot
Match: ASK6_ARATH (SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.984e-21 Identity = 54/87 (62.07%), Postives = 65/87 (74.71%), Query Frame = 2 Query: 95 IKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFV-KVDQNTLFDLILAANYLNIKGLLDLT 352 IK M EDDCAD IPLPNVTS IL VIEYCKKHV +S E+DLK WDA+F+ K++Q+ LFD+++AANYLNI+ LLDLT Sbjct: 3 IKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKHVV---------ESKEEDLKKWDAEFMKKMEQSILFDVMMAANYLNIQSLLDLT 80
BLAST of CX300484 vs. ExPASy Swiss-Prot
Match: ASK21_ARATH (SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.928e-14 Identity = 48/147 (32.65%), Postives = 84/147 (57.14%), Query Frame = 2 Query: 26 ITLKSSDGETFEVEETVALESQTI-KHMVEDDCADT---VIPLPN-VTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEE 451 I L+++DG +VE+ VA+ I + +++ + I LP V +LS + +YC+ H G +K + K +D F+++D L +L AA+ L +K L+DLT + +A +I+GKTPEEIR+ F++ +D + +E+ E Sbjct: 18 IWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFDYCRFHQVPGRSNK--------ERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLE 156
BLAST of CX300484 vs. ExPASy Swiss-Prot
Match: ASK20_ARATH (SKP1-like protein 20 OS=Arabidopsis thaliana GN=ASK20 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.928e-14 Identity = 51/155 (32.90%), Postives = 88/155 (56.77%), Query Frame = 2 Query: 2 ETMSSEKKITLKSSDGETFEVEETVALESQTI-KHMVEDDCADT---VIPLPN-VTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEE 451 ETM S I L+++DG +VE+ VA+ I + +++ + I LP V + S +++YC+ H G +K + KT+D F+++D L +L AA+ L +K L+DLT + +A +I+GK PEEIR+ F++ +D + +E+ E Sbjct: 12 ETMKSY--IWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDYCRFHQLPGRSNK--------ERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKNPEEIREIFHLPDDLTEEEKLE 156 The following BLAST results are available for this feature:
BLAST of CX300484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300484 ID=CX300484; Name=CX300484; organism=Citrus clementina; type=EST; length=560bpback to top |