CX300486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_BACME (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus megaterium GN=gap PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20 Identity = 52/108 (48.15%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 324 KGKLNG A+RVPTPN K+ E+VN A +E+A+ +LKGIL +EPLVS D+ M +MVKVI+WYDNE GYS RVVDLA +A Sbjct: 224 KGKLNGGAMRVPTPNVSLVDLVAELDKEVTVEDVNNALKEAAEGDLKGILGYSEEPLVSGDYNGNINSSTIDALSTMVMEGNMVKVISWYDNESGYSNRVVDLAQYIA 331
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P2_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Bacillus subtilis GN=gapB PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.003e-19 Identity = 52/112 (46.43%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 336 KGKL+G+ALRVP PN AEEVN AF+ +A + G+L DEPLVS D+ M D VKV+AWYDNEWGYS RVVDL VA K Sbjct: 224 KGKLHGLALRVPVPNVSLVDLVVDLKTDVTAEEVNEAFKRAAKTSMYGVLDYSDEPLVSTDYNTNPHSAVIDGLTTMVMEDRKVKVLAWYDNEWGYSCRVVDLIRHVAARMK 335
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P2_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MW2) GN=gapA2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18 Identity = 50/105 (47.62%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 315 +GKL+G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 225 EGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P2_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MSSA476) GN=gapA2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18 Identity = 50/105 (47.62%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 315 +GKL+G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 225 EGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P2_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MRSA252) GN=gapA2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18 Identity = 50/105 (47.62%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 315 +GKL+G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 225 EGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPHSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P2_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain N315) GN=gapA2 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18 Identity = 50/105 (47.62%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 315 +GKL+G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 225 EGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P2_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA2 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18 Identity = 50/105 (47.62%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 315 +GKL+G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 225 EGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P2_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain COL) GN=gapA2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18 Identity = 50/105 (47.62%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 315 +GKL+G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 225 EGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_THEMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermotoga maritima GN=gap PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 9.387e-18 Identity = 45/107 (42.06%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 321 KGKL+G+A+RVPTP+ K+T EEVNA +E+ + LKGI+ DEP+VS D +G +VKV +WYDNE+GYS RVVD +++ Sbjct: 224 KGKLDGMAIRVPTPDGSITDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNEYGYSNRVVDTLELL 330
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P1_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gap1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.226e-17 Identity = 45/103 (43.69%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 309 KGKL G+A RVPTPN K T EE+ AA + +A+ ELKGIL + +VS+DFR + + KV++WYDNEWGYS RV+DL Sbjct: 226 KGKLTGMAFRVPTPNVSVVDLTFKTEKATSYEEICAAMKTAAEGELKGILGYTADDVVSMDFRTDPRSSIFDAGAGIGLNSNFFKVVSWYDNEWGYSCRVIDL 328 The following BLAST results are available for this feature:
BLAST of CX300486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300486 ID=CX300486; Name=CX300486; organism=Citrus clementina; type=EST; length=542bpback to top |