CX300486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_CHLTR (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia trachomatis GN=gap PE=3 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 2.925e-11 Identity = 38/112 (33.93%), Postives = 54/112 (48.21%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 336 KGKL G+A RVP + S T E + A + +A+ +K I+ +E +VS DF + D K++AWYDNE GY+ R+VDL + V N K Sbjct: 223 KGKLTGMAFRVPVADVSVVDLTVKLSSATTYEAICEAVKHAANTSMKNIMYYTEEAVVSSDFIGCEYSSVFDAQAGVALNDRFFKLVAWYDNEIGYATRIVDLLEYVQENSK 334
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.925e-11 Identity = 44/116 (37.93%), Postives = 58/116 (50.00%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKK-TFAEEVNAAFRESADNE-------LKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 324 KGKL+G A RVP P+ +K + EEVN FRE+A LK IL C++P+VS D + D++V + AWYDNEWGYS R+ DL +A Sbjct: 224 KGKLDGTARRVPVPDGSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDI-VGNPHSAIFDAPLTQVIDNLVHIAAWYDNEWGYSCRLRDLVIYLA 338
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_STRAU (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces aureofaciens GN=gap PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.820e-11 Identity = 37/107 (34.58%), Postives = 54/107 (50.47%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 324 GKL+G ++RVP P ++ +EV A+R +A L G+L ++PLVS D G +KV+AWYDNEWG+S RV+D ++A Sbjct: 225 GKLSGDSIRVPVPVGSIVELNTTVARDVTRDEVLDAYRAAAQGPLAGVLEYSEDPLVSSDITGNPASSIFDSELTRVDGRH-IKVVAWYDNEWGFSNRVIDTLQLLA 330
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P2_DROSU (Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragment) OS=Drosophila subobscura GN=Gapdh2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.820e-11 Identity = 36/92 (39.13%), Postives = 46/92 (50.00%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNE 279 GKL G+A RVPTPN K +E+ A +E+A+ LKGIL DE +VS DF + D VK+I+WYDNE Sbjct: 213 GKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNE 304
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_CRYNE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus neoformans GN=GPD PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 4.989e-11 Identity = 36/108 (33.33%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADN-ELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 324 GKL G++ RVPT + K EE+ ++++++ ELKGIL ++ +VS DF + + VK+++WYDNE+GYS+RV DL +A Sbjct: 225 GKLTGMSFRVPTSDVSVVDLVCRIEKGASYEEIKNVIKKASESPELKGILGYTEDAVVSTDFIGSTESSIFDAQAGIALNANFVKLVSWYDNEYGYSRRVCDLISYIA 332
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_CHLMU (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia muridarum GN=gap PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.989e-11 Identity = 38/112 (33.93%), Postives = 53/112 (47.32%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 336 KGKL G+A RVP + S T E V A + +A ++ I+ +E +VS DF + D K+IAWYDNE GY+ R+VDL + + N K Sbjct: 224 KGKLTGMAFRVPVADVSVVDLTVKLSSATTYEAVCEAVKHAASTSMRNIMHYTEEAVVSSDFIGCEYSSVFDAQAGVALNDRFFKLIAWYDNEIGYATRIVDLLEYIQGNSK 335
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: E4PD_SHEFN (D-erythrose-4-phosphate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=epd PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11 Identity = 33/102 (32.35%), Postives = 49/102 (48.04%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 306 K K I++RVPT N KK E++N+ + +++ GIL DEPLVS DF +VK++ W DNEWG++ R++D Sbjct: 226 KDKFEAISVRVPTINVTAIDLSVTLEKKVNIEQINSVLQRASNGSFNGILGYTDEPLVSCDFNHDPRSSIVDGTQTRVSAGHLVKLLLWCDNEWGFANRMLD 327
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: E4PD_SHEAM (D-erythrose-4-phosphate dehydrogenase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=epd PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11 Identity = 36/104 (34.62%), Postives = 48/104 (46.15%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 312 K K I++RVPT N + VNAA + +AD GIL DEPLVS DF +VK++ W DNEWG++ R++D A Sbjct: 226 KDKFEAISVRVPTINVTAIDLSVTLDTRVDIATVNAALKAAADGSASGILGYTDEPLVSCDFNHDPRSSVVDGTQTRVSAGHLVKMLLWCDNEWGFANRMLDTA 329
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: E4PD_PSYIN (D-erythrose-4-phosphate dehydrogenase OS=Psychromonas ingrahamii (strain 37) GN=epd PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11 Identity = 34/107 (31.78%), Postives = 53/107 (49.53%), Query Frame = 1 Query: 7 KLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 327 K IA+RVPT N SK +E+N ++++ LK IL + PLVS+DF ++VK++ W DNEWG++ R++D + +AN Sbjct: 229 KFEAIAVRVPTINVTAMDLSITVSKDVTIQEINDCLLKASETNLKDILGYTEAPLVSIDFNHDPRSCIIDGTQTRVSDGNLVKLLVWCDNEWGFANRLLDTSFYLAN 335 The following BLAST results are available for this feature:
BLAST of CX300486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300486 ID=CX300486; Name=CX300486; organism=Citrus clementina; type=EST; length=542bpback to top |