CX300486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_MYCTU (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium tuberculosis GN=gap PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.091e-17 Identity = 46/110 (41.82%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 330 KGKL+G ALRVP P S + +E+NAAF+ +A+ LKGIL D P+VS D + DD KV++WYDNEWGYS R+VDL +V + Sbjct: 230 KGKLDGYALRVPIPTGSVTDLTVDLSTRASVDEINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVI-DDQAKVVSWYDNEWGYSNRLVDLVTLVGKS 338
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_MYCBO (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium bovis GN=gap PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.091e-17 Identity = 46/110 (41.82%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 330 KGKL+G ALRVP P S + +E+NAAF+ +A+ LKGIL D P+VS D + DD KV++WYDNEWGYS R+VDL +V + Sbjct: 230 KGKLDGYALRVPIPTGSVTDLTVDLSTRASVDEINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVI-DDQAKVVSWYDNEWGYSNRLVDLVTLVGKS 338
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P2_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA2 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.567e-17 Identity = 47/105 (44.76%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 315 +GKL+G+ALRVPT N + +VN AF+ + +L G+L V + PLVSVDF MG + VKVIAWYDNEWGYS RVV++AD Sbjct: 225 EGKLHGMALRVPTKNVSLVDLVVDLEQNVTVTQVNDAFKNA---DLSGVLDVEEAPLVSVDFNTNPHSAIIDSQSTMVMGQNKVKVIAWYDNEWGYSNRVVEVAD 326
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3PC_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Hordeum vulgare GN=GAPC PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.038e-16 Identity = 43/102 (42.16%), Postives = 57/102 (55.88%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 309 GKL G+A RVPT + +K E++ AA +E ++ LKGIL DE LVS DF+ + D+ VK+++WYDNEWGYS RVVDL Sbjct: 196 GKLTGMAFRVPTVDVSVVDLTVRLAKPATYEQIKAAIKEESEGNLKGILGYVDEDLVSTDFQGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDL 297
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4) HSP 1 Score: 86.2705 bits (212), Expect = 1.038e-16 Identity = 43/103 (41.75%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 309 KGKL G+A RVPTP+ +K T +E+ AA +++++ L GIL DE +VS DF+ + + KV+AWYDNEWGYS RVVDL Sbjct: 228 KGKLTGMAFRVPTPDVSVVDLTFKTAKATSYKEICAAMKQASEGSLAGILGYTDEEVVSTDFQGDTHSSIFDAGAGIELNSNFFKVVAWYDNEWGYSNRVVDL 330
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 1.038e-16 Identity = 43/103 (41.75%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 309 KGKL G+A RVPTP+ +K T +E+ AA +++++ L GIL DE +VS DF+ + + KV+AWYDNEWGYS RVVDL Sbjct: 228 KGKLTGMAFRVPTPDVSVVDLTFKTAKATSYKEICAAMKQASEGSLAGILGYTDEEVVSTDFQGDTHSSIFDAGAGIELNSNFFKVVAWYDNEWGYSNRVVDL 330
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_MYCAV (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium avium GN=gapA PE=3 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 1.355e-16 Identity = 45/110 (40.91%), Postives = 59/110 (53.64%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 330 KGKL+G ALRVP P K E++NAAF+ +A+ LKGIL D P+VS D + D+ KV++WYDNEWGYS R+VDL +V + Sbjct: 230 KGKLDGYALRVPIPTGSVTDLTAELKKPASVEDINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVI-DNQAKVVSWYDNEWGYSNRLVDLVALVGKS 338
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3PC_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chlamydomonas reinhardtii GN=GAPC PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.355e-16 Identity = 45/108 (41.67%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 324 KGKL G+A RVPT + K T E++ A +E+++ E+KG+L+ DE +VS DF + VK++AWYDNEWGYS RVVDLA VA Sbjct: 227 KGKLTGMAFRVPTNDVSVVDLTVTLEKATTYEDIMKALKEASEGEMKGVLAYTDEDVVSSDFVTDPASCTVDAKAGIMLSPTFVKLVAWYDNEWGYSNRVVDLALHVA 334
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P2_STAES (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA2 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.770e-16 Identity = 46/104 (44.23%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 312 +GKL+G+ALRVPT N + +VN AF+ + +L G+L V + PLVSVDF MG + VKVIAWYDNEWGYS RVV++A Sbjct: 225 EGKLHGMALRVPTKNVSLVDLVVDLEQNVTVTQVNDAFKNA---DLSGVLDVEEAPLVSVDFNTNPHSAIIDSQSTMVMGQNKVKVIAWYDNEWGYSNRVVEVA 325
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_ZYMMO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zymomonas mobilis GN=gap PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.020e-16 Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESAD-NELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 312 KGKL+GI++RVPTP+ + T AEE+N+ + +AD ++ G+L DEPLVS DF + + +V+AWYDNEWG+S R+VD A Sbjct: 226 KGKLDGISIRVPTPDVSLVDFTFVPQRDTTAEEINSVLKAAADTGDMTGVLGYTDEPLVSRDFYSDPHSSTVDSRETAVLEGKLARVVAWYDNEWGFSNRMVDTA 330 The following BLAST results are available for this feature:
BLAST of CX300486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300486 ID=CX300486; Name=CX300486; organism=Citrus clementina; type=EST; length=542bpback to top |