CX300486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.944e-16 Identity = 42/107 (39.25%), Postives = 58/107 (54.21%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 324 GKL G+A RVPT N K E + AA +E+++ ELKGIL ++ +VS D + D+ VK+++WYDNEWGYS+RV+DL VA Sbjct: 225 GKLTGMAFRVPTSNVSVVDLTCRLEKPASYETIKAALKEASEGELKGILGYTEDEIVSSDLNGNANSSIFDAKAGISLNDNFVKLVSWYDNEWGYSRRVLDLLSYVA 331
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_BACFR (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacteroides fragilis GN=gap PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 3.944e-16 Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 324 GKL G+A RVPT + K E+NAA +E+++ ELKGIL ++ +VS DFR + + KV++WYDNEWGYS +V ++A ++A Sbjct: 225 GKLTGMAFRVPTSDVSVVDLTVVLEKAATMAEINAAMKEASEGELKGILGYTEDAVVSTDFRGCANTSIYDSKAGISLDSNFAKVVSWYDNEWGYSNKVCEMARVIA 331
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3PC_GINBI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.944e-16 Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 309 GKL G+A RVPTP+ K +E+ AA +E ++ +LKGIL ++ +VS DF + D+ VK+++WYDNEWGYS RV+DL Sbjct: 231 GKLTGMAFRVPTPDVSVVDLTVRLEKPASYDEIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSSRVIDL 332
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P2_RHOSH (Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhodobacter sphaeroides GN=gapB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.944e-16 Identity = 42/104 (40.38%), Postives = 57/104 (54.81%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 312 KG+L+G+++RVPTPN ++ T EEVNAA +A LKG+L EP VS DF M MV++++WYDNEWG+S R+ D A Sbjct: 223 KGRLDGVSIRVPTPNVSVVDLVFEAARDTTVEEVNAAIEAAACGPLKGVLGFTTEPNVSSDFNHDPHSSVFHMDQTKVMEGRMVRILSWYDNEWGFSNRMADTA 326
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_ASPNG (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus niger GN=gpdA PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 5.151e-16 Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 309 GKL G+A+RVPT N K T +E+ A +++++NELKGIL ++ +VS D + + VK+++WYDNEWGYS+RVVDL Sbjct: 225 GKLTGMAMRVPTSNVSVVDLTCRLEKATSYDEIKKALKDASENELKGILGYTEDDIVSSDLNGDDHSSIFDAKAGIALNSNFVKLVSWYDNEWGYSRRVVDL 326
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_MYCLE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium leprae GN=gapA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.786e-16 Identity = 44/110 (40.00%), Postives = 57/110 (51.82%), Query Frame = 1 Query: 1 KGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 330 KGKL+G ALRVP P SK E+NA F+++A+ LKGIL D P+VS D + KV++WYDNEWGYS R+VDL +V + Sbjct: 230 KGKLDGYALRVPIPTGSVTDLTADLSKCVSVNEINAVFQDAAEGRLKGILKYVDAPIVSSDIVTDPHSSIFDSGLTKVIA-SQAKVVSWYDNEWGYSNRLVDLVGLVGKS 338
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_DROHY (Glyceraldehyde-3-phosphate dehydrogenase OS=Drosophila hydei GN=Gapdh1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.786e-16 Identity = 43/102 (42.16%), Postives = 55/102 (53.92%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 309 GKL G+A RVPTPN K +E+ A +E+A+ LKGIL DE +VS DF + D VK+I+WYDNE+GYS RV+DL Sbjct: 223 GKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFEPKAGISLNDKFVKLISWYDNEFGYSNRVIDL 324
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P2_DROPS (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila pseudoobscura pseudoobscura GN=Gapdh2 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 8.786e-16 Identity = 43/102 (42.16%), Postives = 55/102 (53.92%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 309 GKL G+A RVPTPN K +E+ A +E+A+ LKGIL DE +VS DF + D VK+I+WYDNE+GYS RV+DL Sbjct: 223 GKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDL 324
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P2_DROME (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila melanogaster GN=Gapdh2 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 8.786e-16 Identity = 43/102 (42.16%), Postives = 55/102 (53.92%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 309 GKL G+A RVPTPN K +E+ A +E+A+ LKGIL DE +VS DF + D VK+I+WYDNE+GYS RV+DL Sbjct: 223 GKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDL 324
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_XANFL (Glyceraldehyde-3-phosphate dehydrogenase OS=Xanthobacter flavus GN=gap PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.147e-15 Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 312 GKL+G ++RVPTPN + T EE+N A +A +LKGIL D+P VS+DF M +V+V++WYDNEWG+S R+ D A Sbjct: 226 GKLDGTSIRVPTPNVSVIDLKFVAKRATSKEEINEAIIAAASQQLKGILGFTDQPNVSIDFNHNPNSSTFHLDQTKVMEGTLVRVLSWYDNEWGFSNRMSDTA 328 The following BLAST results are available for this feature:
BLAST of CX300486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300486 ID=CX300486; Name=CX300486; organism=Citrus clementina; type=EST; length=542bpback to top |