CX300486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3PC_RANAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ranunculus acris GN=GAPC PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.360e-15 Identity = 40/102 (39.22%), Postives = 56/102 (54.90%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 309 GKL G+A RVPT + KK ++ AA +E ++ +LKGIL ++ +VS DF + D+ VK+++WYDNEWGYS RVVDL Sbjct: 229 GKLTGMAFRVPTVDVSVVGLTVRLEKKATYADIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIALNDNCVKLVSWYDNEWGYSSRVVDL 330
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_EMENI (Glyceraldehyde-3-phosphate dehydrogenase OS=Emericella nidulans GN=gpdA PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 5.695e-15 Identity = 37/107 (34.58%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 324 GKL G+A+RVPT N K +++ A +++++NELKGIL ++ +VS D + + +K+++WYDNEWGYS+RVVDL ++ Sbjct: 225 GKLTGMAMRVPTSNVSVVDLTVRTEKAVTYDQIKDAVKKASENELKGILGYTEDDIVSTDLNGDTRSSIFDAKAGIALNSNFIKLVSWYDNEWGYSRRVVDLITYIS 331
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_CRYPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryphonectria parasitica PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.695e-15 Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 324 GKL G+++RVPT N K E++ A +++AD LKG+L+ ++ +VS D + D VK+++WYDNEWGYS+RV+DL VA Sbjct: 225 GKLTGMSMRVPTSNVSVVDLTVRIEKGATYEQIKTAVKKAADGPLKGVLAYTEDDVVSTDMNGNPNSSIFDAKAGISLNDHFVKLVSWYDNEWGYSRRVLDLISHVA 331
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_CLAPU (Glyceraldehyde-3-phosphate dehydrogenase OS=Claviceps purpurea GN=GPD-1 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.695e-15 Identity = 41/107 (38.32%), Postives = 57/107 (53.27%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 324 GKL G+++RVPTPN K +E+ A +E+A+ L GIL ++ +VS D + + VK+IAWYDNEWGYS+RV+DL VA Sbjct: 225 GKLTGMSMRVPTPNVSVVDLTVRIEKGATYDEIKATVKEAANGSLAGILGYTEDDIVSSDMNGNTNSSIFDAKAGISLNKNFVKLIAWYDNEWGYSRRVLDLLAYVA 331
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P2_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schizosaccharomyces pombe GN=gpd3 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.695e-15 Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 327 GKL G+A RVPTP+ +K T E++ AA + +++ +KG+L ++ +VS DF + VK+++WYDNEWGYS RVVDL A+ Sbjct: 226 GKLTGMAFRVPTPDVSVVDLTVKLAKPTNYEDIKAAIKAASEGPMKGVLGYTEDSVVSTDFCGDNHSSIFDASAGIQLSPQFVKLVSWYDNEWGYSHRVVDLVAYTAS 333
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P1_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schizosaccharomyces pombe GN=tdh1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.695e-15 Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 324 GKL G+A RVPTP+ +K T E++ AA + +++ +KG+L ++ +VS DF + VK+++WYDNEWGYS+RVVDL A Sbjct: 226 GKLTGMAFRVPTPDVSVVDLTVKLAKPTNYEDIKAAIKAASEGPMKGVLGYTEDAVVSTDFCGDNHSSIFDASAGIQLSPQFVKLVSWYDNEWGYSRRVVDLVAYTA 332
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P1_DROME (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Drosophila melanogaster GN=Gapdh1 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 5.695e-15 Identity = 42/102 (41.18%), Postives = 53/102 (51.96%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 309 GKL G+A RVPTPN K +E+ A E++ LKGIL DE +VS DF + D VK+I+WYDNE+GYS RV+DL Sbjct: 223 GKLTGMAFRVPTPNVSVVDLTVRLGKGATYDEIKAKVEEASKGPLKGILGYTDEEVVSTDFFSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDL 324
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_RAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus GN=Gapdh PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 7.438e-15 Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 327 GKL G+A RVPTPN K +++ +++A+ LKGIL ++ +VS DF + D+ VK+I+WYDNE+GYS RVVDL +A+ Sbjct: 224 GKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKKVVKQAAEGPLKGILGYTEDQVVSCDFNSNSHSSTFDAGAGIALNDNFVKLISWYDNEYGYSNRVVDLMAYMAS 331
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_PHYIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Phytophthora infestans GN=GPDA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.438e-15 Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 330 GKL G++ RVPT + +E+ AA + +++NE+KGIL ++ +VS DF + DD VK+++WYDNEWGYS RV+DL + + N Sbjct: 223 GKLTGMSFRVPTADVSVVDLTARLVNPASYDEIKAAIKSASENEMKGILGYTEKAVVSSDFIGDSHSSIFDAEAGIALTDDFVKLVSWYDNEWGYSSRVLDLIEHMVKN 331
BLAST of CX300486 vs. ExPASy Swiss-Prot
Match: G3P_CRIGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Cricetulus griseus GN=GAPDH PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 9.714e-15 Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 4 GKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 327 GKL G+A RVPTPN K E++ +++++ LKGIL ++ +VS DF + D+ VK+I+WYDNE+GYS RVVDL +A+ Sbjct: 224 GKLTGMAFRVPTPNVSVVDLTCRLEKPAKYEDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDSHSSTFDAGAGIALNDNFVKLISWYDNEFGYSNRVVDLMAYMAS 331 The following BLAST results are available for this feature:
BLAST of CX300486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300486 ID=CX300486; Name=CX300486; organism=Citrus clementina; type=EST; length=542bpback to top |