CX300488

Overview
NameCX300488
Unique NameCX300488
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length635
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTZ1_DIACA (Glutathione S-transferase 1 OS=Dianthus caryophyllus GN=GST1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.035e-14
Identity = 60/162 (37.04%), Postives = 78/162 (48.15%), Query Frame = 2
Query:   83 RVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKL------VKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLP 550
            RV + L  K ++FE   VDL KGEH  PE+LKL P G +PV+  GD  + +S AII Y  EK+      LL +  ++R L  Q   +   N   P+  + V      KLG   DEKL      +KK    L K+L  +       KY  GD   LADL   P
Sbjct:   22 RVRIALHLKGLDFEYKAVDLFKGEHLTPEFLKLNPLGYVPVLVHGDIVIADSLAIIMYLEEKFPE--NPLLPQDLQKRALNYQAANIVTSNIQ-PLQNLAVLNYIEEKLG--SDEKLSWAKHHIKKGFSALEKLLKGH-----AGKYATGDEVGLADLFLAP 173          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTT2_MUSDO (Glutathione S-transferase 2 OS=Musca domestica GN=Gst2 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.035e-14
Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 2
Query:   56 YGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHL 547
            Y P  A  + VI+      IE     ++L +GEH  PE+LK+ P   +P + D  F ++ESRAI+ Y  EKY  Q   L     ++R L+ Q L  +         + T      +K     D +L KK E  L + L+++   LS+SKY AG+  +LADL+ L
Sbjct:    5 YLPLSAPCRSVIMTAKALGIELNKKLLNLFEGEHLKPEFLKINPQHTIPTLVDNGFAMWESRAIMVYLVEKYGKQNDPLYPSCPKKRALINQRLYFDMGTLWKSYADYTYPQFRENK---PADPELFKKFESAL-EFLNIF---LSQSKYAAGETMTLADLAIL 161          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTT3_MUSDO (Glutathione S-transferase 3 OS=Musca domestica GN=Gst3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.177e-14
Identity = 55/164 (33.54%), Postives = 81/164 (49.39%), Query Frame = 2
Query:   56 YGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHL 547
            Y P  A  + VI+      IE     ++L +GEH  PE+LK+ P   +P + D  F ++ESRAI+ Y  EKY  Q   L     ++R L+ Q L  +         + T      +K     D +L KK E  L + L+++   LS+SKY AG   +LADL+ L
Sbjct:    5 YLPLSAPCRSVIMTAKALGIELNKKLLNLFEGEHLKPEFLKINPQHTIPTLVDNGFAMWESRAIMVYLVEKYGKQNDPLYPSCPKKRALINQRLYFDMGTLWKSYADYTYPQFRENK---PADPELFKKFESAL-EFLNIF---LSQSKYAAGQTMTLADLAIL 161          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTT1_LUCCU (Glutathione S-transferase 1-1 OS=Lucilia cuprina GN=GST1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.383e-13
Identity = 52/164 (31.71%), Postives = 78/164 (47.56%), Query Frame = 2
Query:   56 YGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHL 547
            Y P  A  + V++      IE     ++L  GEH  PE+LK+ P   +P + DGDF L+ESRAI+ Y  EKY  +   L  K  ++R ++ Q L  +    +    +     +FA       D +L KK E       D     L   +Y+AGD  ++ADL+ L
Sbjct:    5 YLPGSAPCRSVLMTAKALGIELNKKLLNLQAGEHLKPEFLKINPQHTIPTLVDGDFALWESRAIMVYLVEKY-GKNDSLFPKCPKKRAVINQRLYFDMGTLYKSFADYYYPQIFAK---APADPELYKKME----AAFDFLNTFLEGHQYVAGDSLTVADLALL 160          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTT4_MUSDO (Glutathione S-transferase 4 OS=Musca domestica GN=Gst4 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.724e-13
Identity = 55/165 (33.33%), Postives = 77/165 (46.67%), Query Frame = 2
Query:   56 YGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFAS-KLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHL 547
            Y P  A  + V++      IE     + L +G H  PE+LK+ P   +P + D  F L+ESRAI+ Y  EKY  Q   L     ++R L+ Q L  +       +Y+      +   K     D +L KK E      LD     LS+SKY AGD  +LADL+ L
Sbjct:    5 YLPLSAPCRSVLMTAKALGIELNKKLLKLFEGGHLKPEFLKINPQHTIPTLVDNGFALWESRAIMVYLVEKYGKQDDPLYPSCPKKRALINQRLYFDMGT----LYQGFANYFYPQFKEKKPADPELFKKFE----VTLDFLNTFLSESKYAAGDSLTLADLALL 161          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTT2_HUMAN (Glutathione S-transferase theta-2 OS=Homo sapiens GN=GSTT2 PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 9.764e-13
Identity = 58/201 (28.86%), Postives = 103/201 (51.24%), Query Frame = 2
Query:   41 MVVKVYGPAYASPKRVIVCLIEKQ-IEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAH----NYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEER-LSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEY-MIRDRKHVSAW 622
            M ++++    + P R +    +K  I  E   VDL+KG+H++ E+L++   G LP ++DGDF L ES AI+ Y + KY++          + R  V ++L   A      +  P++   VQ+L    +G+ V E+ V+++   + + L   E++ L    +LAG   +LADL  L   + L+ P+   Y +   R  ++AW
Sbjct:    1 MGLELFLDLVSQPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDGDFILTESSAILIYLSCKYQTP-DHWYPSDLQARARVHEYLGWHADCIRGTFGIPLW---VQVL-GPLIGVQVPEEKVERNRTAMDQALQWLEDKFLGDRPFLAGQQVTLADLMAL---EELMQPVALGYELFEGRPRLAAW 193          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTT1_MUSDO (Glutathione S-transferase 1 OS=Musca domestica GN=Gst1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.666e-12
Identity = 52/164 (31.71%), Postives = 77/164 (46.95%), Query Frame = 2
Query:   56 YGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHL 547
            Y P  A  + V++      IE     ++L  GEH  PE+LK+ P   +P + DGDF L+ESRAI+ Y  EKY  +   L  K  ++R ++ Q L  +    +    +     +FA       D +L KK E       D     L   +Y AGD  ++ADL+ L
Sbjct:    5 YLPGSAPCRSVLMTAKALGIELNKKLLNLQAGEHLKPEFLKINPQHTIPTLVDGDFALWESRAIMVYLVEKY-GKTDSLFPKCPKKRAVINQRLYFDMGTLYKSFADYYYPQIFAK---APADPELFKKIE----TAFDFLNTFLKGHEYAAGDSLTVADLALL 160          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTT2_MOUSE (Glutathione S-transferase theta-2 OS=Mus musculus GN=Gstt2 PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 2.175e-12
Identity = 50/197 (25.38%), Postives = 98/197 (49.75%), Query Frame = 2
Query:   41 MVVKVYGPAYASPKRVIVCLIEKQ-IEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSK-YLAGDFFSLADLSHLPFTQYLVGPMEKEY-MIRDRKHVSAW 622
            M +++Y    + P R +    +K  I F+T  VD++KG+H + ++ ++     +PV++DG F L ES AI+ Y + KY+           + R  V ++L   A N       +    +    +G+ V ++ V+++ +++  VL   E++  + + +L G   +LADL  L   + L+ P+   Y +   R  ++AW
Sbjct:    1 MGLELYLDLLSQPSRAVYIFAKKNGIPFQTRTVDILKGQHMSEQFSQVNCLNKVPVLKDGSFVLTESTAILIYLSSKYQ-VADHWYPADLQARAQVHEYLGWHADNIRGTFGVLLWTKVLGPLIGVQVPQEKVERNRDRMVLVLQQLEDKFLRDRAFLVGQQVTLADLMSL---EELMQPVGLGYNLFEGRPQLTAW 193          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GST1D_ANOGA (Glutathione S-transferase 1, isoform D OS=Anopheles gambiae GN=GstD1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.841e-12
Identity = 52/162 (32.10%), Postives = 77/162 (47.53%), Query Frame = 2
Query:   56 YGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLS 541
            Y P  A  + V +      +E      DL+KGEH  PE+LKL P   +P + D  F L+ESRAI  Y AEKY  +  +L  K  ++R +V Q L  +    +    +     +FA +     +EK +K +   L   L+  E       Y AG+  ++ADLS
Sbjct:    5 YLPGSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQHCIPTLVDNGFALWESRAIQIYLAEKY-GKDDKLYPKDPQKRAVVNQRLYFDMGTLYQRFADYHYPQIFAKQPANPENEKKMKDAVGFLNTFLEGQE-------YAAGNDLTIADLS 158          
BLAST of CX300488 vs. ExPASy Swiss-Prot
Match: GSTT4_HUMAN (Glutathione S-transferase theta-4 OS=Homo sapiens GN=GSTT4 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12
Identity = 50/169 (29.59%), Postives = 86/169 (50.89%), Query Frame = 2
Query:   41 MVVKVYGPAYASPKRVIVCLIEKQ-IEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMT-VQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSK-YLAGDFFSLADL 538
            M +++Y    + P R +    +K  I FE   VDLIKG H + EY+ + P   LP ++DG F L ES AI+ Y   KY S  +         R  V++++  +   +  P+ ++  ++LL     G  V  + ++ + E++   L ++EE   + K ++ G+  SLADL
Sbjct:    1 MGLELYLDLLSQPCRAVYIFAKKNDIPFELRIVDLIKGHHHSKEYIDINPLRKLPSLKDGKFILSESAAILYYLCRKY-SAPSHWCPPDLHARARVDEFVAWQHTAFQLPMKKIVWLKLLIPKITGEEVSAEKMEHAVEEVKNSLQLFEEYFLQDKMFITGNQISLADL 168          
The following BLAST results are available for this feature:
BLAST of CX300488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
GSTZ1_DIACA3.035e-1437.04Glutathione S-transferase 1 OS=Dianthus caryophyll... [more]
GSTT2_MUSDO3.035e-1433.54Glutathione S-transferase 2 OS=Musca domestica GN=... [more]
GSTT3_MUSDO5.177e-1433.54Glutathione S-transferase 3 OS=Musca domestica GN=... [more]
GSTT1_LUCCU4.383e-1331.71Glutathione S-transferase 1-1 OS=Lucilia cuprina G... [more]
GSTT4_MUSDO5.724e-1333.33Glutathione S-transferase 4 OS=Musca domestica GN=... [more]
GSTT2_HUMAN9.764e-1328.86Glutathione S-transferase theta-2 OS=Homo sapiens ... [more]
GSTT1_MUSDO1.666e-1231.71Glutathione S-transferase 1 OS=Musca domestica GN=... [more]
GSTT2_MOUSE2.175e-1225.38Glutathione S-transferase theta-2 OS=Mus musculus ... [more]
GST1D_ANOGA2.841e-1232.10Glutathione S-transferase 1, isoform D OS=Anophele... [more]
GSTT4_HUMAN6.329e-1229.59Glutathione S-transferase theta-4 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionC07010G07SK SaltLeaf1 Citrus clementina cDNA clone C07010G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300488 ID=CX300488; Name=CX300488; organism=Citrus clementina; type=EST; length=635bp
AGAGAAAAAGTTGAGAAAGAGAATAGCAAAAGCAACAACAATGGTGGTAA
AGGTGTATGGTCCAGCTTATGCTTCTCCCAAACGAGTGATTGTGTGCTTG
ATTGAGAAGCAAATCGAATTTGAAACTGCTCCCGTTGATCTCATCAAAGG
AGAGCATAGAAATCCTGAGTACCTCAAATTGCAGCCTTTCGGTGCTCTGC
CTGTCATTCAAGATGGAGATTTTACGTTATACGAATCTCGAGCTATCATA
AGGTACTACGCCGAAAAGTACAGGTCTCAAGGAACCGAACTTCTGGGAAA
AACAACTGAAGAAAGAGGCCTTGTGGAGCAATGGCTAGAGGTAGAGGCAC
ACAACTATCACCCACCAATTTACGAGATGACTGTGCAACTTTTATTTGCC
TCCAAGTTGGGACTTTCTGTTGATGAAAAATTGGTAAAGAAGAGTGAAGA
AAAACTTGGAAAAGTTCTTGATGTTTACGAGGAGAGGCTCTCAAAGAGCA
AGTATTTGGCAGGAGATTTCTTCAGCCTGGCTGATCTGAGTCACCTTCCA
TTTACTCAATACTTGGTTGGGCCGATGGAGAAGGAGTACATGATTAGAGA
CAGAAAGCATGTGAGTGCTTGGTGGGATGATATTA
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