CX300489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_CHLRE (Photosystem I reaction center subunit IV, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAE PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.888e-15 Identity = 40/61 (65.57%), Postives = 46/61 (75.41%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 255 KRG+ VKILR ESYW+N +G VV+VDQ RYPVVVRF NYA V+TNNYALDE+ K Sbjct: 38 KRGSLVKILRPESYWFNQVGKVVSVDQSGV-RYPVVVRFENQNYAGVTTNNYALDEVVAAK 97
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_GUITH (Photosystem I reaction center subunit IV OS=Guillardia theta GN=psaE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.131e-14 Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 252 KRG+KV+ILR+ESYWY +G+V VD RYPVVVRF KV+Y+ V+TNN++LDE+ EV Sbjct: 3 KRGSKVRILRKESYWYQEVGTVATVDTSG-IRYPVVVRFEKVSYSGVNTNNFSLDEVIEV 61
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_ANASP (Photosystem I reaction center subunit IV OS=Anabaena sp. (strain PCC 7120) GN=psaE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.131e-14 Identity = 35/61 (57.38%), Postives = 51/61 (83.61%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 255 +RG+KV+ILR ESYW+ +G+V +VDQ +YPV+VRF+KVNYA ++TNN+A+DE+ EV+ Sbjct: 3 QRGSKVRILRPESYWFQDVGTVASVDQSG-IKYPVIVRFDKVNYAGINTNNFAVDELIEVE 62
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_MASLA (Photosystem I reaction center subunit IV OS=Mastigocladus laminosus GN=psaE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.930e-14 Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 255 +RG+KV+ILR ESYW+ IG+V +++Q RYPV+VRF+KVNYA V+TNN+A E+ EV+ Sbjct: 3 QRGSKVRILRPESYWFQDIGTVASIEQGGTIRYPVIVRFDKVNYAGVNTNNFAEYELVEVE 63
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_ANAVT (Photosystem I reaction center subunit IV OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaE PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 2.520e-14 Identity = 34/61 (55.74%), Postives = 51/61 (83.61%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 255 +RG+KV+ILR ESYW+ +G+V +VDQ +YPV+VRF+KVNY+ ++TNN+A+DE+ EV+ Sbjct: 3 QRGSKVRILRPESYWFQDVGTVASVDQSG-IKYPVIVRFDKVNYSGINTNNFAVDELIEVE 62
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_CYACA (Photosystem I reaction center subunit IV OS=Cyanidium caldarium GN=psaE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.291e-14 Identity = 34/61 (55.74%), Postives = 51/61 (83.61%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 255 K+G++V+ILR ESYW+N IG+V VDQ RYPV+VRF+KVNY+ ++TNN+A++E+ E++ Sbjct: 3 KKGSQVRILRPESYWHNEIGTVATVDQSG-IRYPVIVRFDKVNYSGINTNNFAVNELVEIQ 62
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_SYNJA (Photosystem I reaction center subunit IV OS=Synechococcus sp. (strain JA-3-3Ab) GN=psaE PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.614e-14 Identity = 34/61 (55.74%), Postives = 48/61 (78.69%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 255 +RGAKV++LR+ESYWY +G+V AVD YPV+VRF+K+NY N++TNN+ DE+E V+ Sbjct: 4 QRGAKVRVLRKESYWYRDVGTVAAVDTSG-ILYPVIVRFDKINYYNINTNNFREDELEVVE 63
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_NOSS8 (Photosystem I reaction center subunit IV OS=Nostoc sp. (strain PCC 8009) GN=psaE PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.332e-14 Identity = 34/61 (55.74%), Postives = 49/61 (80.33%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 255 +RG+KV+ILR ESYW+ +G+V +VDQ +YPV+VRF KVNY+ ++TNN+A DE+ EV+ Sbjct: 3 QRGSKVRILRPESYWFQDVGTVASVDQSG-IKYPVIVRFEKVNYSGINTNNFAEDELVEVE 62
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_TRIEI (Photosystem I reaction center subunit IV OS=Trichodesmium erythraeum (strain IMS101) GN=psaE PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.576e-14 Identity = 36/67 (53.73%), Postives = 51/67 (76.12%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYA-------NVSTNNYALDEIEEV 252 KRG+KV+ILR+ESYWY +G+V +VD+ +YPV+VRF+KVNYA V+TNN+A+DE+ E+ Sbjct: 3 KRGSKVRILRKESYWYQDVGTVASVDKS-GIKYPVIVRFDKVNYAGSSGSPTGVNTNNFAIDEVVEI 68
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_NOSP7 (Photosystem I reaction center subunit IV OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=psaE PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.576e-14 Identity = 33/61 (54.10%), Postives = 49/61 (80.33%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 255 +RG+KV+ILR ESYW+ +G+V ++DQ +YPV+VRF KVNY+ ++TNN+A DE+ EV+ Sbjct: 3 QRGSKVRILRPESYWFQDLGTVASIDQSG-IKYPVIVRFEKVNYSGINTNNFAQDELVEVE 62 The following BLAST results are available for this feature:
BLAST of CX300489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300489 ID=CX300489; Name=CX300489; organism=Citrus clementina; type=EST; length=402bpback to top |