CX300489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_PHATR (Photosystem I reaction center subunit IV OS=Phaeodactylum tricornutum GN=psaE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.251e-13 Identity = 35/59 (59.32%), Postives = 45/59 (76.27%), Query Frame = 1 Query: 76 RGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 252 RG++V+ILR ESYW+N +G+V VDQ RYP VVRF KVNY+ +TNN+AL E+ EV Sbjct: 4 RGSEVRILREESYWFNEVGTVATVDQSG-IRYPAVVRFEKVNYSGTNTNNFALSELVEV 61
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_ODOSI (Photosystem I reaction center subunit IV OS=Odontella sinensis GN=psaE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.251e-13 Identity = 33/59 (55.93%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 76 RGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 252 RG+KV+ILR+ESYW+N +G++ +DQ RYP VVRF VNY+ +TNN+AL+E+ EV Sbjct: 4 RGSKVRILRKESYWFNQVGTIATIDQSG-IRYPAVVRFENVNYSGTNTNNFALEELIEV 61
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_PORYE (Photosystem I reaction center subunit IV OS=Porphyra yezoensis GN=psaE PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.059e-12 Identity = 34/57 (59.65%), Postives = 46/57 (80.70%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEI 243 +RG+KVKILR+ESYWY IG+V A+D+ +YPV+VRF KVNY NV+TN++A E+ Sbjct: 2 ERGSKVKILRKESYWYQEIGTVAAIDKS-GIKYPVLVRFEKVNYNNVNTNSFADTEL 57
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_PORUM (Photosystem I reaction center subunit IV OS=Porphyra umbilicalis GN=psaE PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.059e-12 Identity = 34/57 (59.65%), Postives = 47/57 (82.46%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEI 243 +RG+KVKILR+ESYWY IG+V A+D+ +YPV+VRF KVNY NV+TN++A +E+ Sbjct: 2 ERGSKVKILRKESYWYQEIGTVAAMDKS-GIKYPVLVRFEKVNYNNVNTNSFADNEL 57
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_PORPU (Photosystem I reaction center subunit IV OS=Porphyra purpurea GN=psaE PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.059e-12 Identity = 34/57 (59.65%), Postives = 47/57 (82.46%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEI 243 +RG+KVKILR+ESYWY IG+V A+D+ +YPV+VRF KVNY NV+TN++A +E+ Sbjct: 2 ERGSKVKILRKESYWYQEIGTVAAMDKS-GIKYPVLVRFEKVNYNNVNTNSFADNEL 57
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_FREDI (Photosystem I reaction center subunit IV OS=Fremyella diplosiphon GN=psaE PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.059e-12 Identity = 32/60 (53.33%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 252 +RG+KV+ILR ESYW+ +G+V ++DQ +Y V+VRF+KVNY+ ++TNN+A DE+ EV Sbjct: 2 QRGSKVRILRPESYWFQDVGTVASIDQSG-IKYSVIVRFDKVNYSGINTNNFAEDELLEV 60
BLAST of CX300489 vs. ExPASy Swiss-Prot
Match: PSAE_SYNP2 (Photosystem I reaction center subunit IV OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=psaE PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 2.608e-11 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 1 Query: 73 KRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNY-------ANVSTNNYALDEIEEV 252 +RG+KVKILR+ESYWY +G+V ++D+ YPV+VRFNKVNY ++TNN+A E+E V Sbjct: 4 ERGSKVKILRKESYWYGDVGTVASIDKS-GIIYPVIVRFNKVNYNGFSGSAGGLNTNNFAEHELEVV 69 The following BLAST results are available for this feature:
BLAST of CX300489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300489 ID=CX300489; Name=CX300489; organism=Citrus clementina; type=EST; length=402bpback to top |