CX300501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.036e-28 Identity = 61/102 (59.80%), Postives = 74/102 (72.55%), Query Frame = 3 Query: 3 ILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V AP A+TCGQVTA LAPC+P+L+ GR P CC GV+ L G+A+TT DR+ AC CLK A I+GI N AAG+PS C V IPYKISPSTDCS V+ Sbjct: 15 MVVVAPHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.141e-28 Identity = 54/92 (58.70%), Postives = 73/92 (79.35%), Query Frame = 3 Query: 33 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ITCGQV+++LAPCI +++ GG PP CC+G+R++N ARTT DR+AACNCLK+ G+I G+ PN AA LP +CGV +PYKIS ST+C+ V+ Sbjct: 1 ITCGQVSSNLAPCINYVKGGGAVPPA-CCNGIRNVNNLARTTADRRAACNCLKQLSGSIPGVNPNNAAALPGKCGVNVPYKISASTNCATVK 91
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.770e-28 Identity = 59/101 (58.42%), Postives = 70/101 (69.31%), Query Frame = 3 Query: 3 ILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 +L A AI+CGQV +++APCI + R G P CCSGVRSLN AARTT DR+AACNCLK A + G+ AA +PS+CGV IPY IS STDCSRV Sbjct: 19 LLAAATSEAAISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV 119
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.770e-28 Identity = 58/101 (57.43%), Postives = 70/101 (69.31%), Query Frame = 3 Query: 3 ILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 +L A+TCGQV++++ PC+ + R G P CCSGVRSLN AARTT DR+AACNCLK A IRG+ AA +PS+CGV IPY IS STDCSRV Sbjct: 21 VLAATTSEAAVTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.770e-28 Identity = 61/104 (58.65%), Postives = 77/104 (74.04%), Query Frame = 3 Query: 3 ILVTAPVTN-AITCGQVTASLAPCIPFLR-TGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V AP+ A+T GQVT SLAPCI +LR +G PP CC+G++SLN AA+TTP RQAAC C+K A I GI +A+GLP +CGV IPYKISPSTDC+ V+ Sbjct: 17 MVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.770e-28 Identity = 61/104 (58.65%), Postives = 77/104 (74.04%), Query Frame = 3 Query: 3 ILVTAPVTN-AITCGQVTASLAPCIPFLR-TGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V AP+ A+T GQVT SLAPCI +LR +G PP CC+G++SLN AA+TTP RQAAC C+K A I GI +A+GLP +CGV IPYKISPSTDC+ V+ Sbjct: 13 MVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.145e-27 Identity = 56/103 (54.37%), Postives = 77/103 (74.76%), Query Frame = 3 Query: 3 ILVTAPVTNA-ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++++AP+ A I+CG V+ +L PC+ +L+ GG P P CC GV+ LNGAARTT DR+AACNCLK + G+I G+KP A LP +CGVR+PY IS ST+C+ +R Sbjct: 16 VVISAPMAEAAISCGTVSGALVPCLTYLK-GGPGPSPQCCGGVKRLNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPYTISTSTNCNTIR 117
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 1.496e-27 Identity = 55/101 (54.46%), Postives = 70/101 (69.31%), Query Frame = 3 Query: 3 ILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 +L+ AP +A+TCGQV + LAPCI + P CC GVR+LN AA TT DRQ C CLK+ + G++P++ AG+PS+CGV IPY ISPSTDCSRV Sbjct: 18 LLLAAPAASAVTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.352e-27 Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 3 Query: 3 ILVTAPVTN-AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V AP+ AI+CG VT+ L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNCLK A G+I + N AA LP +CGV IPYKIS ST+C+ V+ Sbjct: 8 MVVIAPMAEGAISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 109
BLAST of CX300501 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.352e-27 Identity = 57/102 (55.88%), Postives = 72/102 (70.59%), Query Frame = 3 Query: 3 ILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V AP A++CGQV + LAPC+P+L+ GR P CC GV+ L GAA++ DR+ AC CLK A I+GI AAGLP CGV IPYKISPSTDCS+V+ Sbjct: 15 MVVVAPHAEALSCGQVQSGLAPCLPYLQ--GRGPLGSCCGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114 The following BLAST results are available for this feature:
BLAST of CX300501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300501 ID=CX300501; Name=CX300501; organism=Citrus clementina; type=EST; length=392bpback to top |